RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ZNF155Q12901 538 aaPredicted RBP17.67■□□□□ 0.42
CBX1-202ENST00000393408 QPRTQ15274 297 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 AADACL4Q5VUY2 407 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 FAM20CQ8IXL6 584 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 GJD3Q8N144 294 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ACOT4Q8N9L9 421 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 OR4Q3Q8NH05 313 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 TRIM43Q96BQ3 446 aaPredicted RBP17.67■□□□□ 0.42
CBX1-202ENST00000393408 POLMQ9NP87 494 aaPredicted RBP17.67■□□□□ 0.42
CBX1-202ENST00000393408 PLSCR3Q9NRY6 295 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ACSL5Q9ULC5 683 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 CLCA2Q9UQC9 943 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 TRPM6Q9BX84 2022 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 C1QTNF3-AMACRE9PGA6 284 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 HPGDSO60760 199 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 AIFM1O95831 613 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 C8orf89P0DMQ9 161 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 GAAP10253 952 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 GNSP15586 552 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 RAB28P51157 221 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ABHD17CQ6PCB6 329 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 OR4F15Q8NGB8 312 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 PIGXQ8TBF5 258 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 POF1BQ8WVV4 589 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 RFKQ969G6 155 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ATF6BQ99941 703 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ANKRD19PQ9H560 264 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 SLC13A4Q9UKG4 626 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 CES1P1Q9UKY3 287 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ENTPD4Q9Y227 616 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 SURF4O15260 269 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 EMC8O43402 210 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 ACP5P13686 325 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 HOXB3P14651 431 aaPredicted RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 ATP5A1P25705 553 aaKnown RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 HLA-DMAP28067 261 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 TRHRP34981 398 aaPredicted RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 TRIM23P36406 574 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 ST3GAL3Q11203 375 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 C18orf63Q68DL7 685 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 THOC7Q6I9Y2 204 aaKnown RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 SLC30A6Q6NXT4 461 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 ZNF649Q9BS31 505 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 ANTXRLA6NF34 631 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 CH25HO95992 272 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 YES1P07947 543 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 SLC2A2P11168 524 aaPredicted RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 MAP2K3P46734 347 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 PRR5P85299 388 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 METAP1DQ6UB28 335 aaPredicted RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 TRIM48Q8IWZ4 208 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 UBASH3BQ8TF42 649 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 ZC3HAV1LQ96H79 300 aaKnown RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 COQ7Q99807 217 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 TMED9Q9BVK6 235 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 TRMT61BQ9BVS5 477 aaKnown RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 ZDHHC4Q9NPG8 344 aa17.66■□□□□ 0.42
CBX1-202ENST00000393408 EXOGQ9Y2C4 368 aaKnown RBP17.66■□□□□ 0.42
CBX1-202ENST00000393408 SHISA3A0PJX4 238 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 CSNK2A2P19784 350 aaPredicted RBP17.65■□□□□ 0.42
CBX1-202ENST00000393408 CPN2P22792 545 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 FPR3P25089 353 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 PKLRP30613 574 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 MC3RP41968 323 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 STAT5AP42229 794 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 TGM3Q08188 693 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 ACSM1Q08AH1 577 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 DSG2Q14126 1118 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 P2RY14Q15391 338 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 SLC48A1Q6P1K1 146 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 RRM2BQ7LG56 351 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 Q8N402 240 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 NUP43Q8NFH3 380 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 OSTF1Q92882 214 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 ZNF707Q96C28 371 aaPredicted RBP17.65■□□□□ 0.42
CBX1-202ENST00000393408 HDHD5Q9BXW7 423 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 BEX2Q9BXY8 128 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 TEX101Q9BY14 249 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 BTBD1Q9H0C5 482 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 OSGEPL1Q9H4B0 414 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 TBC1D17Q9HA65 648 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 SLC6A20Q9NP91 592 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 EQTNQ9NQ60 294 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 MBNL1Q9NR56 388 aaKnown RBP17.65■□□□□ 0.42
CBX1-202ENST00000393408 WDR70Q9NW82 654 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 SNRNP200O75643 2136 aaKnown RBP17.65■□□□□ 0.42
CBX1-202ENST00000393408 MKI67P46013 3256 aaKnown RBP17.65■□□□□ 0.42
CBX1-202ENST00000393408 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
CBX1-202ENST00000393408 GUCY1B2O75343 617 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 CCNYL3P0C7X3 344 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 F3P13726 295 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 IL12RB1P42701 662 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 EVX1P49640 407 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 CD83Q01151 205 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 DMPKQ09013 629 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 TMEM44Q2T9K0 475 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 TRIQKQ629K1 86 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 ZNF438Q7Z4V0 828 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 MARCH9Q86YJ5 346 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 NKAIN4Q8IVV8 208 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms