RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZFP64Q9NPA5 681 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 KRCC1Q9NPI7 259 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SIRT7Q9NRC8 400 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 KLF2Q9Y5W3 355 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PIAS3Q9Y6X2 628 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 C2orf92A0A1B0GVN3 265 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SGK494L7N484 410 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 HAS3O00219 553 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SEC14L5O43304 696 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GDI1P31150 447 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CTSCP53634 463 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CRISP1P54107 249 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 IL2P60568 153 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PKIAP61925 76 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ARHGAP1Q07960 439 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 DOC2AQ14183 400 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GTDC1Q4AE62 458 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 HIST2H3PS2Q5TEC6 136 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OTUD1Q5VV17 481 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OR10K2Q6IF99 312 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 UQCC3Q6UW78 93 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 DPPA4Q7L190 304 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SIAH3Q8IW03 269 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NKAPQ8N5F7 415 aaKnown RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 C1orf127Q8N9H9 656 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 WFIKKN2Q8TEU8 576 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SMAP2Q8WU79 429 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SELENOMQ8WWX9 145 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SMARCD1Q96GM5 515 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 UBXN10Q96LJ8 280 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CCNL2Q96S94 520 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SPSB2Q99619 263 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 POLDIP3Q9BY77 421 aaKnown RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 HRH4Q9H3N8 390 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM231Q9H6L2 316 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OR2S2Q9NQN1 319 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 VNN3Q9NY84 501 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM218A2RU14 115 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CCDC85CA6NKD9 419 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 EFCAB7A8K855 629 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 BNIP3LO60238 219 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 MSCO60682 206 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 F2P00734 622 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 THBS1P07996 1170 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PSMB1P20618 241 aaKnown RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CLDN8P56748 225 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 DPYSL2Q16555 572 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 UGT3A2Q3SY77 523 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NHLRC3Q5JS37 347 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 DCST1Q5T197 706 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GLT8D1Q68CQ7 371 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NCBP2-AS2Q69YL0 99 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OR5M10Q6IEU7 315 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OR7E24Q6IFN5 339 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 FAM111BQ6SJ93 734 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 MRPL10Q7Z7H8 261 aaKnown RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ATCAYQ86WG3 371 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 TRAPPC5Q8IUR0 188 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PRSS58Q8IYP2 241 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 DEFB106AQ8N104 65 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF433Q8N7K0 673 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SYT14Q8NB59 555 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NPRL2Q8WTW4 380 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CCDC107Q8WV48 283 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 CHFRQ96EP1 664 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 FCRL4Q96PJ5 515 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PCYT2Q99447 389 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ADAM2Q99965 735 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GDF15Q99988 308 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 C19orf43Q9BQ61 176 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SUV39H2Q9H5I1 410 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 TRPV4Q9HBA0 871 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 TLR9Q9NR96 1032 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 MED9Q9NWA0 146 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 A0A0D9SG52 128 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PMS2P1A4D2B8 440 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 MGAT4DA6NG13 374 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 STBD1O95210 358 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 C22orf31O95567 290 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 IFNW1P05000 195 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 EPB42P16452 691 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 POU3F2P20265 443 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 C5AR1P21730 350 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 SDHAP31040 664 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 BDKRB1P46663 353 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 WNT4P56705 351 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PPA1Q15181 289 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 GLYR1Q49A26 553 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 FAM46CQ5VWP2 391 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ETV3LQ6ZN32 361 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PCSK9Q8NBP7 692 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 OR5M9Q8NGP3 310 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 HMGB4Q8WW32 186 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 EDEM1Q92611 657 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 MRPS24Q96EL2 167 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 SEPT5Q99719 369 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 NOX3Q9HBY0 568 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 HEBP1Q9NRV9 189 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CXorf65A6NEN9 183 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 MAGEB17A8MXT2 336 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms