RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 MED12Q93074 2177 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 WDR91A4D1P6 747 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 C2orf72A6NCS6 295 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 C19orf84I3L1E1 186 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 PEX11AO75192 247 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 GLI4P10075 376 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 MAPK1P28482 360 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 IL12BP29460 328 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 CRYZQ08257 329 aaKnown RBP18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 ATP6AP1LQ52LC2 224 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 NHSL2Q5HYW2 709 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 C6orf136Q5SQH8 315 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 C1orf185Q5T7R7 199 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 LILRB4Q8NHJ6 448 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 ZBED6CLQ96FA7 236 aaPredicted RBP18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 PGM2Q96G03 612 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 LMF2Q9BU23 707 aaKnown RBP18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 CENPHQ9H3R5 247 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 ACSS1Q9NUB1 689 aaPredicted RBP18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 ALKBH4Q9NXW9 302 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 GIMAP2Q9UG22 337 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 CSMD1Q96PZ7 3565 aa18.78■□□□□ 0.6
UBE2E3-201ENST00000392415 C15orf38-AP3S2A0A0A6YYH1 394 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 ITM2AO43736 263 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 CBR3O75828 277 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 SERPINE1P05121 402 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 PTGER4P35408 488 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 MRPS22P82650 360 aaKnown RBP18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 HSPB3Q12988 150 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 GAB1Q13480 694 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 MPP2Q14168 576 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 TOMM20Q15388 145 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 EIPR1Q53HC9 387 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 VASNQ6EMK4 673 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 LRIG3Q6UXM1 1119 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 R3HCC1LQ7Z5L2 792 aaKnown RBP18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 ULK2Q8IYT8 1036 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 FAM83FQ8NEG4 500 aaPredicted RBP18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 ZFP28Q8NHY6 868 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 EFHD2Q96C19 240 aaPredicted RBP18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 TIMP4Q99727 224 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 NTMQ9P121 344 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 MAPRE3Q9UPY8 281 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 HCFC1P51610 2035 aa18.77■□□□□ 0.6
UBE2E3-201ENST00000392415 INTS1Q8N201 2190 aaKnown RBP18.77■□□□□ 0.59
UBE2E3-201ENST00000392415 FBN2P35556 2912 aa18.77■□□□□ 0.59
UBE2E3-201ENST00000392415 TTC36A6NLP5 189 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 SKAP2O75563 359 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 LYPLA1O75608 230 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 ZWINTO95229 277 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 HSPA4LO95757 839 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 PRPS2P11908 318 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 PRF1P14222 555 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 DDX5P17844 614 aaKnown RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 GPC1P35052 558 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 KIR3DL1P43629 444 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 MANFP55145 182 aaKnown RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 ZNHIT3Q15649 155 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 CHI3L2Q15782 390 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 PLCZ1Q86YW0 608 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 CCDC71Q8IV32 467 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 PRDM14Q9GZV8 571 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 Q9N2J8 555 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 SERHLQ9NQF3 203 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 ATP6V1HQ9UI12 483 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 CBLCQ9ULV8 474 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 SLC6A5Q9Y345 797 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 WIF1Q9Y5W5 379 aa18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 NUP214P35658 2090 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-201ENST00000392415 AHRRA9YTQ3 701 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 SCAMP2O15127 329 aaKnown RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 MYZAPP0CAP1 466 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 CYP4B1P13584 511 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 COX6B1P14854 86 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 HPCAL1P37235 193 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 RPL3P39023 403 aaKnown RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 MAP3K8P41279 467 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 GAS1P54826 345 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 ABCE1P61221 599 aaKnown RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 PTGR1Q14914 329 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 MLC1Q15049 377 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 DECR1Q16698 335 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 WIPI1Q5MNZ9 446 aaPredicted RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 WDR53Q7Z5U6 358 aaPredicted RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 YRDCQ86U90 279 aaKnown RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 MCEMP1Q8IX19 187 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 FNDC5Q8NAU1 212 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 ACBD4Q8NC06 268 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 OR10Q1Q8NGQ4 319 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 CEP70Q8NHQ1 597 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 HOXB13Q92826 284 aaPredicted RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 ZBTB9Q96C00 473 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 UGT2B28Q9BY64 529 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 ENKD1Q9H0I2 346 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 ZNF395Q9H8N7 513 aaPredicted RBP18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 KCNK9Q9NPC2 374 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 TACC2O95359 2948 aa18.75■□□□□ 0.59
UBE2E3-201ENST00000392415 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.74■□□□□ 0.59
UBE2E3-201ENST00000392415 A0A0G2JNJ9 132 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms