RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 C1QTNF2Q9BXJ5 285 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ALOXE3Q9BYJ1 711 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 BTBD1Q9H0C5 482 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 OR51E2Q9H255 320 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 DNAJC27Q9NZQ0 273 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ZNF780BQ9Y6R6 833 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 A3GALT2U3KPV4 340 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PNMA8CA0A1B0GUJ8 204 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 OR5K3A6NET4 321 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 METTL15A6NJ78 407 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 M0R3H8 397 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 MAN2B1O00754 1011 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ENTPD6O75354 484 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CEACAM5P06731 702 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 FHP07954 510 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 UQCRC1P31930 480 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 IFNGR2P38484 337 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 SNRPGP62308 76 aaKnown RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RUNX1T1Q06455 604 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PIN1Q13526 163 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ARMC4Q5T2S8 1044 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ZNF770Q6IQ21 691 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TMEM64Q6YI46 380 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RBM45Q8IUH3 476 aaKnown RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PIK3R3Q92569 461 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 HTRA1Q92743 480 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 MS4A6EQ96DS6 147 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RADILQ96JH8 1075 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 MACROD1Q9BQ69 325 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 KLHL31Q9H511 634 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ABCB10Q9NRK6 738 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TOR4AQ9NXH8 423 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TVP23BQ9NYZ1 205 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CALML5Q9NZT1 146 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TINAGQ9UJW2 476 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 HCN2Q9UL51 889 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PLEKHM1Q9Y4G2 1056 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PMF1-BGLAPU3KQ54 211 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 A0A0G2JPF8 293 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 HNRNPCL2B2RXH8 293 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 HNRNPCL3B7ZW38 293 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TOR1AO14656 332 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TPST2O60704 377 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 B4GALT2O60909 372 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RECKO95980 971 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 HNRNPCL4P0DMR1 293 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ALPPL2P10696 532 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PIPP12273 146 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ATP5A1P25705 553 aaKnown RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CTHP32929 405 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CSTF2P33240 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CAPZA2P47755 286 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RAB8AP61006 207 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RGS1Q08116 209 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 FAPQ12884 760 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 SEC23BQ15437 767 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 RPE65Q16518 533 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TPRG1LQ5T0D9 272 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PGBD2Q6P3X8 592 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ABHD17CQ6PCB6 329 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 C16orf54Q6UWD8 224 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 ZNF793Q6ZN11 406 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TCEANCQ8N8B7 351 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 APOBEC4Q8WW27 367 aaKnown RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 LCN9Q8WX39 176 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 OTUB1Q96FW1 271 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TMEM80Q96HE8 168 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CMTM3Q96MX0 182 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 NUAK2Q9H093 628 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PRDM8Q9NQV8 689 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 KLHL28Q9NXS3 571 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 CCDC59Q9P031 241 aaKnown RBP9.07□□□□□ -0.96
COL6A3-204ENST00000392003 PEX16Q9Y5Y5 336 aa9.07□□□□□ -0.96
COL6A3-204ENST00000392003 TRBV23OR9-2A0A075B6M9 112 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 MYL12BO14950 172 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 EMC8O43402 210 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 PRKRAO75569 313 aaKnown RBP9.06□□□□□ -0.96
COL6A3-204ENST00000392003 HMGN2P05204 90 aaKnown RBP9.06□□□□□ -0.96
COL6A3-204ENST00000392003 C8orf89P0DMQ9 161 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 GSTM3P21266 225 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 NDUFS1P28331 727 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 FEN1P39748 380 aaKnown RBP9.06□□□□□ -0.96
COL6A3-204ENST00000392003 FGL2Q14314 439 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 IRF3Q14653 427 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 ZIC1Q15915 447 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 TOR2AQ5JU69 321 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 RSBN1Q5VWQ0 802 aaPredicted RBP9.06□□□□□ -0.96
COL6A3-204ENST00000392003 PODNL1Q6PEZ8 512 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 OR2L3Q8NG85 312 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 SLC7A13Q8TCU3 470 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 UCN3Q969E3 161 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 RACGAP1Q9H0H5 632 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 ZNF576Q9H609 170 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 LIN7BQ9HAP6 207 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 MOV10Q9HCE1 1003 aaKnown RBP9.06□□□□□ -0.96
COL6A3-204ENST00000392003 BCL2L10Q9HD36 194 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 TAS2R16Q9NYV7 291 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 SLC17A4Q9Y2C5 497 aa9.06□□□□□ -0.96
COL6A3-204ENST00000392003 DENND4AQ7Z401 1863 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms