RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 WDR53Q7Z5U6 358 aaPredicted RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 CCDC71Q8IV32 467 aaPredicted RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 LIX1Q8N485 282 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 LILRB4Q8NHJ6 448 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 PPP1R14CQ8TAE6 165 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 EFHD2Q96C19 240 aaPredicted RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 PGM2Q96G03 612 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 TIMP4Q99727 224 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 OSBPL11Q9BXB4 747 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 C20orf27Q9GZN8 174 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 OR10H1Q9Y4A9 318 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 ACTL7BQ9Y614 415 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 MED12Q93074 2177 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 C15orf38-AP3S2A0A0A6YYH1 394 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 SNPHO15079 494 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 SKAP2O75563 359 aaPredicted RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 SERPINE1P05121 402 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 IFI6P09912 130 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 KRT20P35900 424 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 FRKP42685 505 aaPredicted RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 ABCE1P61221 599 aaKnown RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 ZNF155Q12901 538 aaPredicted RBP13.59□□□□□ -0.23
SNRPN-202ENST00000390687 EFR3AQ14156 821 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 TOMM20Q15388 145 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 CYP27C1Q4G0S4 372 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 ATP6AP1LQ52LC2 224 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 EIPR1Q53HC9 387 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 LRIG3Q6UXM1 1119 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 B3GNT6Q6ZMB0 384 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 RNF138Q8WVD3 245 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 MTERF3Q96E29 417 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 KCNK9Q9NPC2 374 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 SERHLQ9NQF3 203 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 MAPRE3Q9UPY8 281 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 SLC6A5Q9Y345 797 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 PCDHGB3Q9Y5G1 929 aa13.59□□□□□ -0.23
SNRPN-202ENST00000390687 TMEM114B3SHH9 223 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 CBR3O75828 277 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 HSPA4LO95757 839 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 HOXD4P09016 255 aaPredicted RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 CYP4B1P13584 511 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 GABRA1P14867 456 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 IL12BP29460 328 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 CHRNB4P30926 498 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 GAS1P54826 345 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 CRYZQ08257 329 aaKnown RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 PTGR1Q14914 329 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 NHSL2Q5HYW2 709 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 WIPI1Q5MNZ9 446 aaPredicted RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 C1orf185Q5T7R7 199 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 IL23RQ5VWK5 629 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 VASNQ6EMK4 673 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 CROCCP2Q86T23 111 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 YRDCQ86U90 279 aaKnown RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 ZNF781Q8N8C0 355 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 FAM83FQ8NEG4 500 aaPredicted RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 NUDT8Q8WV74 236 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 ASB5Q8WWX0 329 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 ZBED6CLQ96FA7 236 aaPredicted RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 LMF2Q9BU23 707 aaKnown RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 C1orf50Q9BV19 199 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 UCK2Q9BZX2 261 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 ACSS1Q9NUB1 689 aaPredicted RBP13.58□□□□□ -0.24
SNRPN-202ENST00000390687 NTMQ9P121 344 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 CBLCQ9ULV8 474 aa13.58□□□□□ -0.24
SNRPN-202ENST00000390687 B4DXG7 233 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 ZWINTO95229 277 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 SNRPB2P08579 225 aaKnown RBP13.57□□□□□ -0.24
SNRPN-202ENST00000390687 PRPS2P11908 318 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 BMP7P18075 431 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 EFNA1P20827 205 aaPredicted RBP13.57□□□□□ -0.24
SNRPN-202ENST00000390687 MAPK1P28482 360 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 GABRA3P34903 492 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 GPC1P35052 558 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 ADH7P40394 386 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 MAP3K8P41279 467 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 OR5M10Q6IEU7 315 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 R3HCC1LQ7Z5L2 792 aaKnown RBP13.57□□□□□ -0.24
SNRPN-202ENST00000390687 PLCZ1Q86YW0 608 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 ULK2Q8IYT8 1036 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 FNDC5Q8NAU1 212 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 OR7A2PQ8NGA2 310 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 OR10Q1Q8NGQ4 319 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 HOXB13Q92826 284 aaPredicted RBP13.57□□□□□ -0.24
SNRPN-202ENST00000390687 TUBGCP3Q96CW5 907 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 SORT1Q99523 831 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 Q9N2J8 555 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 FBXL2Q9UKC9 423 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 WIF1Q9Y5W5 379 aa13.57□□□□□ -0.24
SNRPN-202ENST00000390687 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 A0A0G2JNJ9 132 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 C17orf51A8MQB3 221 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 AHRRA9YTQ3 701 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 SCAMP2O15127 329 aaKnown RBP13.56□□□□□ -0.24
SNRPN-202ENST00000390687 LAMP1P11279 417 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 BGNP21810 368 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 SLC1A6P48664 564 aa13.56□□□□□ -0.24
SNRPN-202ENST00000390687 PRKAG1P54619 331 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms