RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 ACOT11Q8WXI4 607 aaPredicted RBP15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 MYEOVQ96EZ4 313 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 ALG8Q9BVK2 526 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 DPH1Q9BZG8 443 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 TRPV4Q9HBA0 871 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 MAB21L2Q9Y586 359 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 AHSA1O95433 338 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 DNASE1P24855 282 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 SWI5Q1ZZU3 235 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 ALG10BQ5I7T1 473 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 GALNTL5Q7Z4T8 443 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 CUEDC1Q9NWM3 386 aaPredicted RBP15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 ASB4Q9Y574 426 aa15.23■□□□□ 0.03
PTPRN2-201ENST00000389413 A0A1W2PQ09 198 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 RNH1P13489 461 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 ACPPP15309 386 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 ZNF20P17024 532 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 SLC35A2P78381 396 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 SCGB2B2Q4G0G5 96 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 TMEM69Q5SWH9 247 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 AGAP7PQ5VUJ5 663 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 TMEM163Q8TC26 289 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 CHTF18Q8WVB6 975 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 COQ8BQ96D53 544 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 MMABQ96EY8 250 aaPredicted RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 HYLS1Q96M11 299 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 UBR3Q6ZT12 1888 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 RBM34P42696 430 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 AKR1D1P51857 326 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 CTU2Q2VPK5 515 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 BCL7AQ4VC05 210 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 COX20Q5RI15 118 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 MEX3DQ86XN8 651 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 GTPBP2Q9BX10 602 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 OCEL1Q9H607 264 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 COPZ2Q9P299 210 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 KANTRA0A1W2PQU2 76 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 S100A9P06702 114 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 HIST1H1TP22492 207 aaPredicted RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 LHCGRP22888 699 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 NNATQ16517 81 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 KLHL26Q53HC5 615 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 FAM83HQ6ZRV2 1179 aaPredicted RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 ZNF765Q7L2R6 523 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 BHLHA9Q7RTU4 235 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 GATSQ8NAP1 163 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 OR8K3Q8NH51 312 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 RBBP9O75884 186 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 TIMP1P01033 207 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 OR3A3P47888 321 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 OR3A2P47893 321 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 GFOD2Q3B7J2 385 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 TCEAL5Q5H9L2 206 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 SPATC1Q76KD6 591 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 CDRT4Q8N9R6 151 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 OR4K13Q8NH42 304 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 SFXN5Q8TD22 340 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 RIT1Q92963 219 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 UBE2FQ969M7 185 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 CENPOQ9BU64 300 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 BCL2L14Q9BZR8 327 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 TMEM38AQ9H6F2 299 aa15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 MRPS17Q9Y2R5 130 aaKnown RBP15.22■□□□□ 0.03
PTPRN2-201ENST00000389413 MEIOCA2RUB1 952 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 OR2A25A4D2G3 310 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 C5orf51A6NDU8 294 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 CENPBD1B2RD01 187 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 TSPAN12O95859 305 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 CEBPBP17676 345 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 PSMB5P28074 263 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 SHC2P98077 582 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 TMED4Q7Z7H5 227 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 SERINC2Q96SA4 455 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 NIPSNAP1Q9BPW8 284 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 MACROD1Q9BQ69 325 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 ADAM29Q9UKF5 820 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 GPR89AB7ZAQ6 455 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 FUCA1P04066 466 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 GPR89BP0CG08 455 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 SSTR4P31391 388 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 HOXD12P35452 270 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 LIPAP38571 399 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 C6orf132Q5T0Z8 1188 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 PYHIN1Q6K0P9 492 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 SPRYD4Q8WW59 207 aaPredicted RBP15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 TSACCQ96A04 125 aaPredicted RBP15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 SERINC1Q9NRX5 453 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 TMEM14AQ9Y6G1 99 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 NPIPA5E9PKD4 350 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 AQP9O43315 295 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 ACP2P11117 423 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 ATF4P18848 351 aaPredicted RBP15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 NTSR1P30989 418 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 PTGER1P34995 402 aa15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 PRDX1Q06830 199 aaKnown RBP15.21■□□□□ 0.03
PTPRN2-201ENST00000389413 ILKQ13418 452 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms