RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 B4DLN1 442 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 K7EMT4 169 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 K7ERI5 159 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 DNASE2O00115 360 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 RFXANKO14593 260 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 NCR3O14931 201 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 BBOX1O75936 387 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CENPBP07199 599 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 STSP08842 583 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SPARCP09486 303 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 WNT2P09544 360 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ESDP10768 282 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CD37P11049 281 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ALOX12P18054 663 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SRIP30626 198 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRCPP42785 496 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CRYBA2P53672 197 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 VSX2P58304 361 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRKCDQ05655 676 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 BST1Q10588 318 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRDX4Q13162 271 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 DCTN2Q13561 401 aaKnown RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 GCKRQ14397 625 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 NAA25Q14CX7 972 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZIC1Q15915 447 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 MEP1AQ16819 746 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ESRGQ1W209 222 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TMEM241Q24JQ0 296 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CCDC144BQ3MJ40 725 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 IGSF11Q5DX21 431 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZRANB3Q5FWF4 1079 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 C1orf220Q5T0J3 134 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 GRTP1Q5TC63 336 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 AMMECR1LQ6DCA0 310 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 C1orf94Q6P1W5 598 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 GUSBP11Q6P575 273 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 FAM19A1Q7Z5A9 133 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 VSIG1Q86XK7 387 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CFAP206Q8IYR0 622 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 Q8N6K4 173 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF527Q8NB42 609 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 C20orf203Q8NBC4 194 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 UXS1Q8NBZ7 420 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR51G1Q8NGK1 321 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR1P1Q8NH06 330 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 RNASE11Q8TAA1 199 aaKnown RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 GSDMBQ8TAX9 411 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ETNPPLQ8TBG4 499 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TSEN15Q8WW01 171 aaKnown RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 RBPMSQ93062 196 aaKnown RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 NEIL2Q969S2 332 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF622Q969S3 477 aaKnown RBP eCLIP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SLC25A38Q96DW6 304 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 NARS2Q96I59 477 aaKnown RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 HPDLQ96IR7 371 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CEP170P1Q96L14 293 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ACCSQ96QU6 501 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TNFRSF13CQ96RJ3 184 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ELAC2Q9BQ52 826 aaKnown RBP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TBL1YQ9BQ87 522 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 H2AFJQ9BTM1 129 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TEKT3Q9BXF9 490 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TTTY10Q9BZA0 68 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 NUP62CLQ9H1M0 184 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SRD5A3Q9H8P0 318 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 KCNK13Q9HB14 408 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 FANCEQ9HB96 536 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SPG21Q9NZD8 308 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SUN2Q9UH99 717 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 CIDEBQ9UHD4 219 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 BTNL2Q9UIR0 455 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRDM4Q9UKN5 801 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 SARDHQ9UL12 918 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 RIPOR2Q9Y4F9 1068 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 WDR90Q96KV7 1748 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 TTC21BQ7Z4L5 1316 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 NACADO15069 1562 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 TET3O43151 1660 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 PCM1Q15154 2024 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 IGHV1OR21-1A0A087WYE8 117 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 TRBV5-4A0A0C4DH59 114 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRSS51A0A1B0GVH4 220 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 A0A1W2PQL4 384 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 GOLGA6L10A6NI86 522 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 SLC15A5A6NIM6 579 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 IGLL5B9A064 214 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 C4orf51C9J302 202 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 C11orf94C9JXX5 98 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 H0YJW9 148 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 NUDT21O43809 227 aaKnown RBP-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRAF2O60831 178 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 SH2D1AO60880 128 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 TACC1O75410 805 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 GCM2O75603 506 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 ERAL1O75616 437 aaKnown RBP-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 SUPT7LO94864 414 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 YIF1AO95070 293 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 GJB5O95377 273 aa-1.38□□□□□ -2.63
RNU6-540P-201ENST00000384622 TGM6O95932 706 aa-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms