RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 GABRA3P34903 492 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 ART1P52961 327 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 PSPHP78330 225 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 ADRM1Q16186 407 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 PGS1Q32NB8 556 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 LSM12Q3MHD2 195 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 TIGD3Q6B0B8 471 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 LACC1Q8IV20 430 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 FNDC5Q8NAU1 212 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 FBXO30Q8TB52 745 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 TIGARQ9NQ88 270 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 FARSBQ9NSD9 589 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 FOXD3Q9UJU5 478 aaPredicted RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 MCTS1Q9ULC4 181 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 ZNF106Q9H2Y7 1883 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 UROSP10746 265 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 NAGAP17050 411 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 PRIM2P49643 509 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 ANXA11P50995 505 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 EEF1A1P68104 462 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 EEF1A1P5Q5VTE0 462 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 GTF2IRD2BQ6EKJ0 949 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 TMEM107Q6UX40 140 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 GTF2IRD2Q86UP8 949 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 P3H2Q8IVL5 708 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 C9orf40Q8IXQ3 194 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 OR9Q1Q8NGQ5 310 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 PPP3R2Q96LZ3 170 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 ZDHHC18Q9NUE0 388 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 C1orf109Q9NX04 203 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 STX18Q9P2W9 335 aaKnown RBP7.2□□□□□ -1.26
FAM49A-201ENST00000381323 BLOC1S6Q9UL45 172 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 POLQO75417 2590 aa7.2□□□□□ -1.26
FAM49A-201ENST00000381323 C4orf51C9J302 202 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 DLX3O60479 287 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 MTHFD2P13995 350 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 GRNP28799 593 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PPICP45877 212 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 GSTM5P46439 218 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 CAPRIN1Q14444 709 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 POU4F3Q15319 338 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ZNF678Q5SXM1 525 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 LETMD1Q6P1Q0 360 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PLCZ1Q86YW0 608 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 CLHC1Q8NHS4 586 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 C16orf78Q8WTQ4 265 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 SECISBP2Q96T21 854 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 MMADHCQ9H3L0 296 aaPredicted RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 NDUFA13Q9P0J0 144 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 DCTN4Q9UJW0 460 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 EMC9Q9Y3B6 208 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 A0A0A6YYD5 115 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 WASHC1A8K0Z3 465 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ARHGEF9O43307 516 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PABPC4LP0CB38 370 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 RNF224P0DH78 156 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ABCD3P28288 659 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 MAD2L1Q13257 205 aaPredicted RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 SPRED3Q2MJR0 410 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 GGTA1PQ4G0N0 100 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ADGRD1Q6QNK2 874 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ARSKQ6UWY0 536 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ZNF527Q8NB42 609 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 RNF217Q8TC41 542 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PAQR8Q8TEZ7 354 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 AENQ8WTP8 325 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 SH3YL1Q96HL8 342 aaPredicted RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 NPAS2Q99743 824 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 TTYH2Q9BSA4 534 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 TRMOQ9BU70 441 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 CCDC134Q9H6E4 229 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PLAC1Q9HBJ0 212 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ZCCHC3Q9NUD5 404 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ZNF226Q9NYT6 803 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PLLPQ9Y342 182 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ASB4Q9Y574 426 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 SCELO95171 688 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 RPS17P08708 135 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 FBXO45P0C2W1 286 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 TFPIP10646 304 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PEPDP12955 493 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 SNRPNP63162 240 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 TRAF3Q13114 568 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 EIPR1Q53HC9 387 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 RNFT1Q5M7Z0 435 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 TCHHL1Q5QJ38 904 aaPredicted RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 LIPMQ5VYY2 423 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 OR2A2Q6IF42 318 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 UBE3DQ7Z6J8 389 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 DCAKDQ8WVC6 231 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ZC3HAV1LQ96H79 300 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 TMEM237Q96Q45 408 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 CLEC4MQ9H2X3 399 aaPredicted RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 WBP11Q9Y2W2 641 aaKnown RBP7.19□□□□□ -1.26
FAM49A-201ENST00000381323 GTF3C1Q12789 2109 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 OR7A17O14581 309 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 ACTL6AO96019 429 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 PRPS2P11908 318 aa7.19□□□□□ -1.26
FAM49A-201ENST00000381323 EIF1AXP47813 144 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms