RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZC3HAV1LQ96H79 300 aaKnown RBP20.9■□□□□ 0.94
U2AF1-202ENST00000380276 Q96MF0 132 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 WFIKKN1Q96NZ8 548 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 BTBD9Q96Q07 612 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 OPN3Q9H1Y3 402 aaPredicted RBP20.9■□□□□ 0.94
U2AF1-202ENST00000380276 FOLH1BQ9HBA9 442 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 VPS29Q9UBQ0 182 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 TRPS1Q9UHF7 1281 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 MED12LQ86YW9 2145 aa20.89■□□□□ 0.94
U2AF1-202ENST00000380276 UQCRHLA0A096LP55 91 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 GNG14A0A1W2PPG7 69 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 C17orf51A8MQB3 221 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 SEC14L5O43304 696 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 CTIFO43310 598 aaKnown RBP20.89■□□□□ 0.93
U2AF1-202ENST00000380276 HCRTR2O43614 444 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 PCDH7O60245 1069 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 LY6G6DO95868 133 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 POU2F1P14859 743 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 CD79BP40259 229 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 ZNF155Q12901 538 aaPredicted RBP20.89■□□□□ 0.93
U2AF1-202ENST00000380276 STX5Q13190 355 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 GBP7Q8N8V2 638 aaPredicted RBP20.89■□□□□ 0.93
U2AF1-202ENST00000380276 MTBPQ96DY7 904 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 PERPQ96FX8 193 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 MRPL57Q9BQC6 102 aaKnown RBP20.89■□□□□ 0.93
U2AF1-202ENST00000380276 MRPL46Q9H2W6 279 aaKnown RBP20.89■□□□□ 0.93
U2AF1-202ENST00000380276 MCM8Q9UJA3 840 aa20.89■□□□□ 0.93
U2AF1-202ENST00000380276 A8MT66 165 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 POC1B-GALNT4F8VUJ3 575 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 CT45A8P0DMV1 189 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 CT45A9P0DMV2 189 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 PEPDP12955 493 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 HK1P19367 917 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 PCSK6P29122 969 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 SERPINB9P50453 376 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 DSCR4P56555 118 aaPredicted RBP20.88■□□□□ 0.93
U2AF1-202ENST00000380276 MRPS22P82650 360 aaKnown RBP20.88■□□□□ 0.93
U2AF1-202ENST00000380276 CT45A2Q5DJT8 189 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 NPSR1Q6W5P4 371 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 ZNF550Q7Z398 422 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 BTLAQ7Z6A9 289 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 FAM9CQ8IZT9 166 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 CDC26Q8NHZ8 85 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 FIG4Q92562 907 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 STARD4Q96DR4 205 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 PAFAH2Q99487 392 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 DSN1Q9H410 356 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 ZDHHC18Q9NUE0 388 aa20.88■□□□□ 0.93
U2AF1-202ENST00000380276 MANBAO00462 879 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 ZIC3O60481 467 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 SUPT7LO94864 414 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 KRT6AP02538 564 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 KRT6BP04259 564 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 CRHP06850 196 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 COL6A2P12110 1019 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 CHN1P15882 459 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 FPR1P21462 350 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 HMOX2P30519 316 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 MAGEA12P43365 314 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 KRT6CP48668 564 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 PNLIPRP2P54317 469 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 CLCQ05315 142 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 BCL2A1Q16548 175 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 ACKR1Q16570 336 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 PPP4R4Q6NUP7 873 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 SYT10Q6XYQ8 523 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 YTHDF3Q7Z739 585 aaKnown RBP20.87■□□□□ 0.93
U2AF1-202ENST00000380276 SAMD14Q8IZD0 417 aaPredicted RBP20.87■□□□□ 0.93
U2AF1-202ENST00000380276 LRRC75A-AS1Q8N1F1 130 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 CIARTQ8N365 385 aaPredicted RBP20.87■□□□□ 0.93
U2AF1-202ENST00000380276 OR4N2Q8NGD1 307 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 UHMK1Q8TAS1 419 aaKnown RBP20.87■□□□□ 0.93
U2AF1-202ENST00000380276 ZNF845Q96IR2 970 aaPredicted RBP20.87■□□□□ 0.93
U2AF1-202ENST00000380276 VSTM2LQ96N03 204 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 PIP5K1AQ99755 562 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 SLC39A3Q9BRY0 314 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 PINK1Q9BXM7 581 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 TAS2R9Q9NYW1 312 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 MRPS18CQ9Y3D5 142 aaKnown RBP20.87■□□□□ 0.93
U2AF1-202ENST00000380276 ABCA2Q9BZC7 2435 aa20.87■□□□□ 0.93
U2AF1-202ENST00000380276 DEFB108AA8MXU0 73 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 TRIM49D1C9J1S8 452 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 H3BML4 177 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 SIAH2O43255 324 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 EVI2BP34910 448 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 MC3RP41968 323 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 EEFSECP57772 596 aaKnown RBP20.86■□□□□ 0.93
U2AF1-202ENST00000380276 B3GALT5-AS1P59052 145 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 BTKQ06187 659 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 CSTF3Q12996 717 aaKnown RBP20.86■□□□□ 0.93
U2AF1-202ENST00000380276 ZNF474Q6S9Z5 364 aaPredicted RBP20.86■□□□□ 0.93
U2AF1-202ENST00000380276 OR5M1Q8NGP8 315 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 ARSGQ96EG1 525 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 COX4I2Q96KJ9 171 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 BBS4Q96RK4 519 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 EBPLQ9BY08 206 aa20.86■□□□□ 0.93
U2AF1-202ENST00000380276 CDC42EP4Q9H3Q1 356 aaKnown RBP20.86■□□□□ 0.93
U2AF1-202ENST00000380276 H0YC42 278 aa20.85■□□□□ 0.93
U2AF1-202ENST00000380276 HSD3B1P14060 373 aa20.85■□□□□ 0.93
U2AF1-202ENST00000380276 CRYGSP22914 178 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms