RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 LNX2Q8N448 690 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 NAXEQ8NCW5 288 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 OR10G2Q8NGC3 310 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 OR2L8Q8NGY9 312 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CREB3L4Q8TEY5 395 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 OTULINQ96BN8 352 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 FCRL1Q96LA6 429 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CSF3RQ99062 836 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 TM9SF3Q9HD45 589 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 ERVK-18Q9QC07 812 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 IL20RAQ9UHF4 553 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 NPIPA5A0A0B4J1W7 369 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 NPIPA7E9PJI5 369 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 FAM20BO75063 409 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 TNFRSF21O75509 655 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 GADD45GO95257 159 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 NPIPA8P0DM63 369 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 MATN1P21941 496 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CPN2P22792 545 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 ATP5A1P25705 553 aaKnown RBP10.16□□□□□ -0.78
NEDD9-201ENST00000379433 RNF165Q6ZSG1 346 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 GLRX5Q86SX6 157 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 SVOPLQ8N434 492 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CHDHQ8NE62 594 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-201ENST00000379433 SLC35G5Q96KT7 338 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CDADC1Q9BWV3 514 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CEPT1Q9Y6K0 416 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 MAP1BP46821 2468 aaKnown RBP10.16□□□□□ -0.78
NEDD9-201ENST00000379433 NPIPB8E9PQR5 432 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 SLC35G6P0C7Q6 338 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 JUNDP17535 347 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 TNNI3P19429 210 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 FPR1P21462 350 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 UQCRC2P22695 453 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 REEP3Q6NUK4 255 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 ABHD17CQ6PCB6 329 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 ARMC8Q8IUR7 673 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 LACC1Q8IV20 430 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 GALNT12Q8IXK2 581 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 PRSS58Q8IYP2 241 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 AQP11Q8NBQ7 271 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 C12orf43Q96C57 262 aaKnown RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 WDR34Q96EX3 536 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 QRFPRQ96P65 431 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 TREX2Q9BQ50 279 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 FAIM2Q9BWQ8 316 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 PELI2Q9HAT8 420 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 CD320Q9NPF0 282 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 TRNAU1APQ9NX07 287 aaKnown RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 ANKMY1Q9P2S6 941 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 B9A039 149 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 SCAF4O95104 1147 aaKnown RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 APOL3O95236 402 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 IFNW1P05000 195 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 QDPRP09417 244 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 UGT2B7P16662 529 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 PPIBP23284 216 aaKnown RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 NPTX1Q15818 432 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 GPR139Q6DWJ6 353 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 BCDIN3DQ7Z5W3 292 aaKnown RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 MAP6Q96JE9 813 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 C7orf34Q96L11 122 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 AMDHD1Q96NU7 426 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 NPLQ9BXD5 320 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-201ENST00000379433 UCK1Q9HA47 277 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF556Q9HAH1 456 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 IMPAD1Q9NX62 359 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 GIN1Q9NXP7 522 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 CORO2BQ9UQ03 480 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 FANCMQ8IYD8 2048 aa10.15□□□□□ -0.78
NEDD9-201ENST00000379433 SGK494L7N484 410 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 HMGN4O00479 90 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 TRMUO75648 421 aaKnown RBP10.15□□□□□ -0.79
NEDD9-201ENST00000379433 ZNF182P17025 639 aaPredicted RBP10.15□□□□□ -0.79
NEDD9-201ENST00000379433 PTBP1P26599 531 aaKnown RBP eCLIP10.15□□□□□ -0.793e-8■■■□□ 15.4
NEDD9-201ENST00000379433 PCGF2P35227 344 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 RPL3P39023 403 aaKnown RBP10.15□□□□□ -0.79
NEDD9-201ENST00000379433 LSSP48449 732 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 HHEXQ03014 270 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 KCNJ8Q15842 424 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 SYT16Q17RD7 645 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 DEFB133Q30KQ1 61 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 AMZ1Q400G9 498 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 CYB5R2Q6BCY4 276 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 FIGLAQ6QHK4 219 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 IGF2-ASQ6U949 168 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 SEZ6L2Q6UXD5 910 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 RAB11FIP2Q7L804 512 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 PM20D2Q8IYS1 436 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 DEPDC7Q96QD5 511 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 BCL2L14Q9BZR8 327 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 LHPPQ9H008 270 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 KIR3DX1Q9H7L2 352 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 ACTR10Q9NZ32 417 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 ASH2LQ9UBL3 628 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 MMP17Q9ULZ9 603 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.79
NEDD9-201ENST00000379433 ZNF780BQ9Y6R6 833 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms