RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 A0A1B0GVC2 190 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 TTLL8A6PVC2 850 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 M0R129 80 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 KIAA0355O15063 1070 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 YY2O15391 372 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 UBL4AP11441 157 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 SLC6A8P48029 635 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 IGFN1Q86VF2 1251 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 SMIM14Q96QK8 99 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 MCTS1Q9ULC4 181 aaKnown RBP12.89□□□□□ -0.35
GPC6-201ENST00000377047 RGS9O75916 674 aaPredicted RBP12.89□□□□□ -0.35
GPC6-201ENST00000377047 HPRP00739 348 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 STOMP27105 288 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
GPC6-201ENST00000377047 MPP2Q14168 576 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 ERV3-1Q14264 604 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 B3GNT9Q6UX72 402 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 KLHDC9Q8NEP7 349 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 OR8J1Q8NGP2 316 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 HHIPL1Q96JK4 782 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 OR51B6Q9H340 312 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 TRAV6A0A075B6T7 132 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 H0YAE9 185 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 CD63P08962 238 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 GGT1P19440 569 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 UQCRC1P31930 480 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 PTGER1P34995 402 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 PPP1R14BQ96C90 147 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 DPH1Q9BZG8 443 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 ADAMTS6Q9UKP5 1117 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 GPR52Q9Y2T5 361 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 LHCGRP22888 699 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 CCR7P32248 378 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 NPRL3Q12980 569 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 OR7A5Q15622 319 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 ARSKQ6UWY0 536 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 TMEM184AQ6ZMB5 413 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 OR5D16Q8NGK9 328 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 FAM171A2A8MVW0 826 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 M0R3H8 397 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 GPR39O43194 453 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 F3P13726 295 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 GSTM2P28161 218 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 MAP4K2Q12851 820 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 CDNFQ49AH0 187 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 TMEM236Q5W0B7 351 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 NADSYN1Q6IA69 706 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 CNEP1R1Q8N9A8 125 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 TM9SF4Q92544 642 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 CAMK2AQ9UQM7 478 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 USP3Q9Y6I4 520 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 SULT2B1O00204 365 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 C1orf105O95561 183 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 FESP07332 822 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 LRRN1Q6UXK5 716 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 CDS1Q92903 461 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 SPTSSAQ969W0 71 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 OR6C2Q9NZP2 312 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 KCNIP3Q9Y2W7 256 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 DLGAP1O14490 977 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 OPN1LWP04000 364 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 SFTPBP07988 381 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 GKN3PP0CG01 181 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 CDKN2CP42773 168 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 RGRP47804 291 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 EXOSC7Q15024 291 aaKnown RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 UGT8Q16880 541 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 DCAF12Q5T6F0 453 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 ZFP41Q8N8Y5 198 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 AKAP1Q92667 903 aaKnown RBP eCLIP12.88□□□□□ -0.35
GPC6-201ENST00000377047 EDAQ92838 391 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 ZNF226Q9NYT6 803 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 LHX3Q9UBR4 397 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 NUP50Q9UKX7 468 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 LCATP04180 440 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 EEF1A1P68104 462 aaKnown RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 C22orf42Q6IC83 251 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 SLC22A16Q86VW1 577 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 TRIM43Q96BQ3 446 aaPredicted RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
GPC6-201ENST00000377047 SAMD8Q96LT4 415 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
GPC6-201ENST00000377047 PEX14O75381 377 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 GCH1P30793 250 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 PRLHRP49683 370 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 RPE65Q16518 533 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 VASH1Q7L8A9 365 aaPredicted RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms