RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ZNF300Q96RE9 604 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 PSD2Q9BQI7 771 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 BHLHE41Q9C0J9 482 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 THUMPD1Q9NXG2 353 aaKnown RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 ERVK-18Q9QC07 812 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 VPS4AQ9UN37 437 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 CORINQ9Y5Q5 1042 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 FEZF1A0PJY2 475 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 CDC14CA4D256 554 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ZNF891A8MT65 544 aaPredicted RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 H0YGG7 62 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 M0R3G1 203 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ADAMDEC1O15204 470 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 SUV39H1O43463 412 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 XPNPEP2O43895 674 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 LCMT2O60294 686 aaKnown RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 KDM1AO60341 852 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 FAM20BO75063 409 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 KLF7O75840 302 aaPredicted RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 EIF2S1P05198 315 aaKnown RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 CD22P20273 847 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 OR1D4P47884 311 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 MLLT10P55197 1068 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ARF3P61204 181 aaPredicted RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 RPS3AP61247 264 aaKnown RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 PIGFQ07326 219 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 NPRL3Q12980 569 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 CHAF1BQ13112 559 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ATP1A4Q13733 1029 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 DOC2AQ14183 400 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 RHBDD2Q6NTF9 364 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 TTLL10Q6ZVT0 673 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ARHGEF39Q8N4T4 335 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ATG16L2Q8NAA4 619 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 C11orf65Q8NCR3 313 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 CHTF18Q8WVB6 975 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 KIAA1143Q96AT1 154 aaPredicted RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 WDR34Q96EX3 536 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 C10orf90Q96M02 699 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 LRFN5Q96NI6 719 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 OR2A5Q96R48 311 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 DOHHQ9BU89 302 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 EBPLQ9BY08 206 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ACOT13Q9NPJ3 140 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ATP6V1HQ9UI12 483 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 FARSAQ9Y285 508 aaKnown RBP11.59□□□□□ -0.55
VRK3-202ENST00000377011 PCDHGA6Q9Y5G7 932 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 MAU2Q9Y6X3 613 aa11.59□□□□□ -0.55
VRK3-202ENST00000377011 ERVH48-1M5A8F1 160 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 MT-ND2P03891 347 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 NPPBP16860 134 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 ALAS2P22557 587 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 CMPK1P30085 196 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 TIA1P31483 386 aaKnown RBP eCLIP11.58□□□□□ -0.56
VRK3-202ENST00000377011 FMO3P31513 532 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 EFNA3P52797 238 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 TUBA1BP68363 451 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 KCNJ10P78508 379 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 PPP1R8Q12972 351 aaKnown RBP11.58□□□□□ -0.56
VRK3-202ENST00000377011 CATSPEREQ5SY80 951 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 SHISA6Q6ZSJ9 500 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 TUBA1AQ71U36 451 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 PRSS41Q7RTY9 318 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 VN1R4Q7Z5H5 301 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 SLC30A8Q8IWU4 369 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 GPR135Q8IZ08 494 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 ZNF540Q8NDQ6 660 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 ZNF740Q8NDX6 193 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 DYNC2LI1Q8TCX1 351 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 ADAMTS17Q8TE56 1095 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 ALPK1Q96QP1 1244 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 BARD1Q99728 777 aaKnown RBP11.58□□□□□ -0.56
VRK3-202ENST00000377011 SGPP1Q9BX95 441 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 ENOPH1Q9UHY7 261 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 DAPK2Q9UIK4 370 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 A3GALT2U3KPV4 340 aa11.58□□□□□ -0.56
VRK3-202ENST00000377011 hCG_2039718K7EN88 272 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 FOXE1O00358 373 aaPredicted RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 COQ9O75208 318 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 CPSF4O95639 269 aaKnown RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 B3GALT4O96024 378 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 LAMP1P11279 417 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 ANXA8P13928 327 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 IDUAP35475 653 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 UGT2B10P36537 528 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 MASP1P48740 699 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 CSNK1G2P78368 415 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 RAE1P78406 368 aaKnown RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 NCF4Q15080 339 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 RGNQ15493 299 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 TBCEQ15813 527 aaPredicted RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 PRTGQ2VWP7 1150 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 PRAMEF13Q5VWM6 474 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 CCDC80Q76M96 950 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 OR6Q1Q8NGQ2 317 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms