RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 PAQR9Q6ZVX9 377 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 Q7L0L9 218 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 LPCAT2Q7L5N7 544 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 DLX4Q92988 240 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 LINC00167Q96N53 147 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 WRAP53Q9BUR4 548 aaKnown RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 TSPY26PQ9H489 355 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 KAT8Q9H7Z6 458 aaKnown RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 COQ10BQ9H8M1 238 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ABCD2Q9UBJ2 740 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 SH3BGRL2Q9UJC5 107 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 FOXJ3Q9UPW0 622 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF256Q9Y2P7 627 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 AP1M2Q9Y6Q5 423 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 CUX2O14529 1486 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 A0A087WZY1 265 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 NPIPA5A0A0B4J1W7 369 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 TTC26A0AVF1 554 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 RNF222A6NCQ9 220 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 LRIT2A6NDA9 550 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 NPIPA5E9PKD4 350 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 E9PMD0 336 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 SGK494L7N484 410 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 CHADO15335 359 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 NDUFA7O95182 113 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 NUDT14O95848 222 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ANXA4P09525 319 aaPredicted RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 SLC35G4P0C7Q5 338 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ADRA1AP35348 466 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 HMGCLP35914 325 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 TRPC1P48995 793 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 POU3F4P49335 361 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 MFAP2P55001 183 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 MRPS6P82932 125 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 EXOSC2Q13868 293 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ABRAXAS2Q15018 415 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 FHL5Q5TD97 284 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 PRR5LQ6MZQ0 368 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 PNCKQ6P2M8 343 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 SLC39A4Q6P5W5 647 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 AFTPHQ6ULP2 937 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ARSKQ6UWY0 536 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ABRAXAS1Q6UWZ7 409 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF562Q6V9R5 426 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 TSEN54Q7Z6J9 526 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 TEX9Q8N6V9 391 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF671Q8TAW3 534 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 GIPC3Q8TF64 312 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 SLC25A36Q96CQ1 311 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 C19orf43Q9BQ61 176 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 FAM173AQ9BQD7 235 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 THUMPD2Q9BTF0 503 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 RBM24Q9BX46 236 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 RPAP3Q9H6T3 665 aaPredicted RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 TRPV5Q9NQA5 729 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 CENPMQ9NSP4 180 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 GHRLQ9UBU3 117 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 ATP6V1HQ9UI12 483 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 PURGQ9UJV8 347 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 MRPL11Q9Y3B7 192 aaKnown RBP1.62□□□□□ -2.15
VPS13A-206ENST00000376646 RNF115Q9Y4L5 304 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 PARD3Q8TEW0 1356 aa1.62□□□□□ -2.15
VPS13A-206ENST00000376646 MFSD2BA6NFX1 497 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 FOXI3A8MTJ6 420 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 H3BTX0 84 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PDLIM1O00151 329 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 SDHDO14521 159 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 LRRTM2O43300 516 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TOXO94900 526 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 OR4F21O95013 312 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MBD3O95983 291 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MDH1P40925 334 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PTGFRP43088 359 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PPIAP62937 165 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF85Q03923 595 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZP4Q12836 540 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TFDP1Q14186 410 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CRMP1Q14194 572 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TRIP10Q15642 601 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CNPY1Q3B7I2 92 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 C14orf28Q4W4Y0 310 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PRR30Q53SZ7 412 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 NHLRC3Q5JS37 347 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF506Q5JVG8 444 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 RNLSQ5VYX0 342 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 DMKNQ6E0U4 476 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 SULT1C3Q6IMI6 304 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 NET1Q7Z628 596 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 LRRC49Q8IUZ0 686 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CCDC36Q8IYA8 594 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 NFAM1Q8NET5 270 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 DNAJA3Q96EY1 480 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 SERAC1Q96JX3 654 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TTYH2Q9BSA4 534 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 FICDQ9BVA6 458 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CARD6Q9BX69 1037 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ABCC13Q9NSE7 274 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 SLC35D1Q9NTN3 355 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 DCAF13Q9NV06 445 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 C1orf123Q9NWV4 160 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms