RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 EIF3FO00303 357 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FCMRO60667 390 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IFNA16P05015 189 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CEBPBP17676 345 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IL1RNP18510 177 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 UGT2B10P36537 528 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 AP2S1P53680 142 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DSG2Q14126 1118 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GPNMBQ14956 572 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 Q6ZNB5 142 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRICKLE2Q7Z3G6 844 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TM9SF4Q92544 642 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PPIL3Q9H2H8 161 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RETREG1Q9H6L5 497 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TAS2R7Q9NYW3 318 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR10H1Q9Y4A9 318 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TRPM6Q9BX84 2022 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZAR1LA6NP61 321 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRRT4C9JH25 899 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PIP5K1CO60331 668 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RLN1P04808 185 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TAS2R38P59533 333 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TRAM2Q15035 370 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRSS53Q2L4Q9 553 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ENPP7Q6UWV6 458 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ESPNLQ6ZVH7 1005 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ERN2Q76MJ5 926 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CXXC5Q7LFL8 322 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR4D11Q8NGI4 311 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR4C6Q8NH72 309 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF514Q96K75 400 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF582Q96NG8 517 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 EXO1Q9UQ84 846 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A075B6Q4 140 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HMGN4O00479 90 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 AK4P27144 223 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PGDP52209 483 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC7A9P82251 487 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FGFBP1Q14512 234 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FAM205BPQ63HN1 556 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RPTNQ6XPR3 784 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 C12orf40Q86WS4 652 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 METTL27Q8N6F8 245 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 BARHL1Q9BZE3 327 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IKZF2Q9UKS7 526 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC7A7Q9UM01 511 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LRRC37A2A6NM11 1700 aa13.54□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LDB3O75112 727 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KHDRBS3O75525 346 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HLA-DQA2P01906 255 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TLX1P31314 330 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MMP12P39900 470 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MRPL19P49406 292 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SRP9P49458 86 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF81P51508 661 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GNA13Q14344 377 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GXYLT1Q4G148 440 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ACOT4Q8N9L9 421 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ORAI1Q96D31 301 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR2A14Q96R47 310 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC6A17Q9H1V8 727 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TMEM138Q9NPI0 162 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ALG5Q9Y673 324 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HEPACAM2A8MVW5 462 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CHURC1-FNTBB4DL54 471 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF670-ZNF695F2Z2N8 137 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRKNO60260 465 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LATS1O95835 1130 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SRPRAP08240 638 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 POLR2CP19387 275 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IRF3Q14653 427 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GRPEL2Q8TAA5 225 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OTUB2Q96DC9 234 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KRCC1Q9NPI7 259 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CNOT2Q9NZN8 540 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RP1L1Q8IWN7 2480 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DOCK4Q8N1I0 1966 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TRAV27A0A087WT01 109 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A087WUU8 490 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A0B4J203 849 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SYPP08247 313 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CCL5P13501 91 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SHC1P29353 583 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IRS1P35568 1242 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF155Q12901 538 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MAB21L1Q13394 359 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF267Q14586 743 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF234Q14588 700 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ANKRD53Q8N9V6 530 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms