RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 KIAA1671Q9BY89 1806 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 GLCEO94923 617 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 UBOX5O94941 541 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ERBB2P04626 1255 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CSKP41240 450 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 RGS6P49758 472 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CHRFAM7AQ494W8 412 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 OR52E8Q6IFG1 317 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 C12orf76Q8N812 135 aaPredicted RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 FBXO36Q8NEA4 188 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 NSMAFQ92636 917 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 LCORQ96JN0 433 aaPredicted RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 ADAM2Q99965 735 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 PIGQQ9BRB3 760 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ZNF2Q9BSG1 426 aaPredicted RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 SGK2Q9HBY8 427 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 C6orf50Q9HD87 102 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 PAK5Q9P286 719 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 MRTO4Q9UKD2 239 aaKnown RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 ANKRD63C9JTQ0 380 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 GRID2O43424 1007 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 SEC14L2O76054 403 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CD1EP15812 388 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 NPR2P20594 1047 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 RARRES1P49788 294 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CNN1P51911 297 aaKnown RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 MTM1Q13496 603 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 RAB31Q13636 194 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 C5orf64Q2M2E5 130 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ARTNQ5T4W7 220 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 NIPA1Q7RTP0 329 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 UBL7Q96S82 380 aaPredicted RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 CCDC134Q9H6E4 229 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ACSS1Q9NUB1 689 aaPredicted RBP8.47□□□□□ -1.05
UBR4-201ENST00000375218 DKKL1Q9UK85 242 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CNTN6Q9UQ52 1028 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 SLC27A6Q9Y2P4 619 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 KCTD3Q9Y597 815 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 NUBP2Q9Y5Y2 271 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 TET1Q8NFU7 2136 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 A0A1B0GV72 72 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 FAM172BPA6NC97 362 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 H3BN98 237 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 GSTA4O15217 222 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 HRO43593 1189 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 VNN1O95497 513 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ANGPTL1O95841 491 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 AMHP03971 560 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ADRB1P08588 477 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 NR4A1P22736 598 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 TEAD1P28347 426 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 SP3Q02447 781 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 POU6F1Q14863 301 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ZNF544Q6NX49 715 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 SV2AQ7L0J3 742 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 COQ8BQ96D53 544 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CAPZA3Q96KX2 299 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 RTP3Q9BQQ7 232 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 TRMOQ9BU70 441 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ELOVL4Q9GZR5 314 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 LDAHQ9H6V9 325 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 BEX1Q9HBH7 125 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 CTPS2Q9NRF8 586 aa8.47□□□□□ -1.05
UBR4-201ENST00000375218 ENSAO43768 121 aaKnown RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 TRIM13O60858 407 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 EIF3GO75821 320 aaKnown RBP eCLIP8.46□□□□□ -1.05
UBR4-201ENST00000375218 TTC4O95801 387 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 B3GALT4O96024 378 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 TYRP14679 529 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 CHI3L1P36222 383 aaPredicted RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 E2F1Q01094 437 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 TNFRSF9Q07011 255 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 HIF1AQ16665 826 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 ANKRD55Q3KP44 614 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 C5orf47Q569G3 176 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 GTPBP8Q8N3Z3 284 aaPredicted RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 ASCC2Q9H1I8 757 aaPredicted RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 CLEC4MQ9H2X3 399 aaPredicted RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 ADARB2Q9NS39 739 aaKnown RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 DCHS1Q96JQ0 3298 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 SMCO3A2RU48 225 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 SNAI1O95863 264 aaPredicted RBP8.46□□□□□ -1.05
UBR4-201ENST00000375218 CD5P06127 495 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 MELTFP08582 738 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 LINC00614P0C842 121 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 NR2F6P10588 404 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 COX4I1P13073 169 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 MTHFD2P13995 350 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 IL1R2P27930 398 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 BLOC1S1P78537 153 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 SLC16A9Q7RTY1 509 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 IRF2BP2Q7Z5L9 587 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 TFAP2DQ7Z6R9 452 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 LGI2Q8N0V4 545 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 TMEM35BQ8NCS4 154 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 AKR1E2Q96JD6 320 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 ZSWIM1Q9BR11 485 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 UBQLN3Q9H347 655 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 C1GALT1Q9NS00 363 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms