RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CNEP1R1Q8N9A8 125 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 OR9A2Q8NGT5 310 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-202ENST00000374426 KAT2AQ92830 837 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 PIGTQ969N2 578 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 ZDHHC18Q9NUE0 388 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 NINJ2Q9NZG7 142 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 SNX6Q9UNH7 406 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 FBN1P35555 2871 aaKnown RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 USF3Q68DE3 2245 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 SLC22A20A6NK97 555 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 H0YC42 278 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 BCAS2O75934 225 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 SBK3P0C264 359 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 CRYGSP22914 178 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 UGT2B10P36537 528 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 KIR2DL2P43627 348 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 ACKR1Q16570 336 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 TCHHL1Q5QJ38 904 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 OR2A2Q6IF42 318 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 PRSS57Q6UWY2 283 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 UBQLNLQ8IYU4 475 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 OR4N2Q8NGD1 307 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 NUDT8Q8WV74 236 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 FIG4Q92562 907 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 EFHD2Q96C19 240 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 ERP27Q96DN0 273 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 DTNBP1Q96EV8 351 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 PIK3IP1Q96FE7 263 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 PGM2Q96G03 612 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 MARK4Q96L34 752 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 Q96MF0 132 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 FAM111AQ96PZ2 611 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 PIGQQ9BRB3 760 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 MED18Q9BUE0 208 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 C1QTNF3Q9BXJ4 246 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 OPN3Q9H1Y3 402 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-202ENST00000374426 PFDN4Q9NQP4 134 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 NMRK1Q9NWW6 199 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF226Q9NYT6 803 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 VPS29Q9UBQ0 182 aa12.45□□□□□ -0.42
CXCL12-202ENST00000374426 DSCAMO60469 2012 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 A8MT66 165 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 KIAA1324LA8MWY0 1029 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 OR4F21O95013 312 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 ESRRBO95718 433 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 CGAP01215 116 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 IL3P08700 152 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 CHN1P15882 459 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 IL12BP29460 328 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 PHBP35232 272 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 KRT20P35900 424 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 SUCLG1P53597 346 aaKnown RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 DSCR4P56555 118 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 SIRPAP78324 504 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 RAE1P78406 368 aaKnown RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 SLC7A5Q01650 507 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 ERCC6LQ2NKX8 1250 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 TSNAXIP1Q2TAA8 658 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 C22orf34Q6ZV56 151 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 CHMP1BQ7LBR1 199 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 YTHDF3Q7Z739 585 aaKnown RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 SLC44A2Q8IWA5 706 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 TMEM151AQ8N4L1 468 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 FADS6Q8N9I5 356 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 OR4K17Q8NGC6 315 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 PPP1R14CQ8TAE6 165 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 EXOSC8Q96B26 276 aaKnown RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 CCL19Q99731 98 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 MRPL57Q9BQC6 102 aaKnown RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 MRPL46Q9H2W6 279 aaKnown RBP12.44□□□□□ -0.42
CXCL12-202ENST00000374426 UBTD1Q9HAC8 227 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 FOLH1BQ9HBA9 442 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 TRPS1Q9UHF7 1281 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 MCM8Q9UJA3 840 aa12.44□□□□□ -0.42
CXCL12-202ENST00000374426 MXRA5Q9NR99 2828 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
CXCL12-202ENST00000374426 TRIM64A6NGJ6 449 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 TRIM64BA6NI03 449 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 MANBAO00462 879 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 SMAD7O15105 426 aaKnown RBP12.43□□□□□ -0.42
CXCL12-202ENST00000374426 PLOD3O60568 738 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 TNFRSF21O75509 655 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 INHBAP08476 426 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 COL6A2P12110 1019 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 PEPDP12955 493 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 HSD3B1P14060 373 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 POU2F1P14859 743 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 FPR1P21462 350 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 HSD3B2P26439 372 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 LOXP28300 417 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-202ENST00000374426 PCSK6P29122 969 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 EVI2BP34910 448 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 HSD17B3P37058 310 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 PSPHP78330 225 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms