RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 GMPPBQ9Y5P6 360 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 FAM221BA6H8Z2 402 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 AGAP5A6NIR3 686 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 PLPP1O14494 284 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 ADAMDEC1O15204 470 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 HCRTR1O43613 425 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 ANGPTL1O95841 491 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 CCL4P13236 92 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 UQCRC2P22695 453 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 GSTM5P46439 218 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 CSNK1G2P78368 415 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 IL1RL1Q01638 556 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 EEF1A2Q05639 463 aaKnown RBP13.39□□□□□ -0.27
HMGA1-203ENST00000374116 PRKCDQ05655 676 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 PRDX1Q06830 199 aaKnown RBP13.39□□□□□ -0.27
HMGA1-203ENST00000374116 SQSTM1Q13501 440 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 KIR2DS3Q14952 304 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 IFI44LQ53G44 452 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 C3orf38Q5JPI3 329 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 DESI1Q6ICB0 168 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 TSPYL5Q86VY4 417 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-203ENST00000374116 POC5Q8NA72 575 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 OR2L3Q8NG85 312 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 PSMA8Q8TAA3 256 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 HTRA1Q92743 480 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 RORBQ92753 470 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 SLC6A16Q9GZN6 736 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 NXF2Q9GZY0 626 aaKnown RBP13.39□□□□□ -0.27
HMGA1-203ENST00000374116 FAM60AQ9NP50 221 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 OCIAD1Q9NX40 245 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
HMGA1-203ENST00000374116 TPRKBQ9Y3C4 175 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 GRIP1Q9Y3R0 1128 aa13.39□□□□□ -0.27
HMGA1-203ENST00000374116 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 METTL15A6NJ78 407 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 H7BY64 318 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 ICMTO60725 284 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 DLGAP3O95886 979 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 ITGA2P17301 1181 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 DDCP20711 480 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 RRM2P31350 389 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 BSGP35613 385 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 CDK6Q00534 326 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 EMX1Q04741 257 aaPredicted RBP13.38□□□□□ -0.27
HMGA1-203ENST00000374116 SLC5A12Q1EHB4 618 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 DEFB110Q30KQ9 67 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 CRB2Q5IJ48 1285 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 PLD3Q8IV08 490 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 NFKBIDQ8NI38 313 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 CNIH3Q8TBE1 160 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 SPPL2AQ8TCT8 520 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 PROX1Q92786 737 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 PMEPA1Q969W9 287 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 SCNM1Q9BWG6 230 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 C12orf10Q9HB07 376 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 SLC6A20Q9NP91 592 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 SOHLH2Q9NX45 425 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 SCN3BQ9NY72 215 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 NDUFAF4Q9P032 175 aa13.38□□□□□ -0.27
HMGA1-203ENST00000374116 TLCD2A6NGC4 264 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 FAM25AB3EWG3 89 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 FAM25CB3EWG5 89 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 FAM25GB3EWG6 89 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 PTGES3LE9PB15 166 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 HAT1O14929 419 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 CTSBP07858 339 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 CYP4B1P13584 511 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 MAPK12P53778 367 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 GALK2Q01415 458 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 ATAD3CQ5T2N8 411 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 TMPRSS7Q7RTY8 843 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 PITX2Q99697 317 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 DPH7Q9BTV6 452 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 SORBS1Q9BX66 1292 aaKnown RBP13.37□□□□□ -0.27
HMGA1-203ENST00000374116 GABARAPL3Q9BY60 117 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 NLNQ9BYT8 704 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 TWSG1Q9GZX9 223 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 RAB33BQ9H082 229 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 MRPS30Q9NP92 439 aaKnown RBP13.37□□□□□ -0.27
HMGA1-203ENST00000374116 THSD1Q9NS62 852 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 EXD2Q9NVH0 621 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 MAP4K5Q9Y4K4 846 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 FRYQ5TBA9 3013 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
HMGA1-203ENST00000374116 FEZF1A0PJY2 475 aa13.36□□□□□ -0.27
HMGA1-203ENST00000374116 E9PQ18 207 aa13.36□□□□□ -0.27
HMGA1-203ENST00000374116 TNFRSF11BO00300 401 aa13.36□□□□□ -0.27
HMGA1-203ENST00000374116 LCMT2O60294 686 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms