RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 UGCGQ16739 394 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 MARC2Q969Z3 335 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 NMNAT2Q9BZQ4 307 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SLAMF7Q9NQ25 335 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 AQP9O43315 295 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SELENOVP59797 346 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 METAP1DQ6UB28 335 aaPredicted RBP14.54□□□□□ -0.08
COL5A1-201ENST00000371817 TMIGD1Q6UXZ0 262 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SUN3Q8TAQ9 357 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 FAM46AQ96IP4 442 aaKnown RBP14.54□□□□□ -0.08
COL5A1-201ENST00000371817 UHRF2Q96PU4 802 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SGIP1Q9BQI5 828 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 FAM96BQ9Y3D0 163 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 MEIS2O14770 477 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 GPR137BO60478 399 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 MMP20O60882 483 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 ARL2P36404 184 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 C6orf136Q5SQH8 315 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 PLPPR4Q7Z2D5 763 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 OR51T1Q8NGJ9 327 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 PGAM5Q96HS1 289 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 URGCP-MRPS24S4R325 110 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF587BE7ETH6 402 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 DPM1O60762 260 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 LALBAP00709 142 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 OR12D1P0DN82 309 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 GK3PQ14409 553 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 HAVCR2Q8TDQ0 301 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 TM9SF4Q92544 642 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 OPA3Q9H6K4 179 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 OR6C75A6NL08 312 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 CELF2O95319 508 aaKnown RBP14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SPATA31D3P0C874 917 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SUMO1P63165 101 aaKnown RBP14.54□□□□□ -0.08
COL5A1-201ENST00000371817 PLP2Q04941 152 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 CRHR2Q13324 411 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 PDZD11Q5EBL8 140 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 FAM205BPQ63HN1 556 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SPATA31D4Q6ZUB0 917 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 RELL1Q8IUW5 271 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 OR4K1Q8NGD4 311 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 G6PC3Q9BUM1 346 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 DVL2O14641 736 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 HLA-DQB2P05538 268 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 TAS2R19P59542 299 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 GSTM4Q03013 218 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF597Q96LX8 424 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 CACNA1DQ01668 2161 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 hCG_1807616A0A1W2PRN6 198 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 NFKBIEO00221 500 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 TRAPPC2P0DI81 140 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 TRAPPC2BP0DI82 140 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 MEX3BQ6ZN04 569 aaKnown RBP14.54□□□□□ -0.08
COL5A1-201ENST00000371817 OR2T11Q8NH01 316 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 C7orf43Q8WVR3 580 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SRA1Q9HD15 236 aaKnown RBP14.54□□□□□ -0.08
COL5A1-201ENST00000371817 C2orf42Q9NWW7 574 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 PCK2Q16822 640 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 OR4K17Q8NGC6 315 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 OR14C36Q8NHC7 312 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 EMC7Q9NPA0 242 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 MAKP20794 623 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 KITLGP21583 273 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 FAM213BQ8TBF2 198 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 KLF15Q9UIH9 416 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 GRXCR1A8MXD5 290 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 DHRS4L1P0CG22 281 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 HSD17B1P14061 328 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 CNR1P21554 472 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 KDELR2P33947 212 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 MLLT3P42568 568 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-201ENST00000371817 GPR4P46093 362 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 LIPJQ5W064 366 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 H3F3CQ6NXT2 135 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 PLD4Q96BZ4 506 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ABRACLQ9P1F3 81 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 LIPT1Q9Y234 373 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 AK6Q9Y3D8 172 aaKnown RBP14.53□□□□□ -0.08
COL5A1-201ENST00000371817 MAOBP27338 520 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 S100A11P31949 105 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 CNR2P34972 360 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 RBM39Q14498 530 aaKnown RBP14.53□□□□□ -0.08
COL5A1-201ENST00000371817 PSRC1Q6PGN9 363 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-201ENST00000371817 NRARPQ7Z6K4 114 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 KRTCAP2Q8N6L1 136 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 OR51A7Q8NH64 312 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF558Q96NG5 402 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ST6GALNAC5Q9BVH7 336 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 SLC22A23A1A5C7 686 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 PFKLP17858 780 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 GRPRP30550 384 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ECH1Q13011 328 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 TMEM225Q6GV28 225 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 RHOXF1Q8NHV9 184 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 TOMM40LQ969M1 308 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 CDKN2AIPNLQ96HQ2 116 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 PLEKHJ1Q9NW61 149 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 POU2F3Q9UKI9 436 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms