RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ACOT11Q8WXI4 607 aaPredicted RBP11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 OR4K3Q96R72 315 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 RNF121Q9H920 327 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 FOLH1BQ9HBA9 442 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 ERVK13-1Q9NX77 482 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 COPZ2Q9P299 210 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 ADAMTS7Q9UKP4 1686 aa11.21□□□□□ -0.61
DEPDC1-201ENST00000370966 KIR2DS5A0A0G2JLQ3 304 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 A0A0G2JNG1 304 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 CD8B2A6NJW9 211 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 KIR2DS3K7RE56 304 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 SCO2O43819 266 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 PLGP00747 810 aaPredicted RBP11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 CD8BP10966 210 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 ARNTP27540 789 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 AHRP35869 848 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 AKR1D1P51857 326 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 EMX1Q04741 257 aaPredicted RBP11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 KIR2DS5Q14953 304 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 DUS1LQ6P1R4 473 aaKnown RBP11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 PEX11GQ96HA9 241 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 GPR78Q96P69 363 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 EVA1AQ9H8M9 152 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 ALKBH4Q9NXW9 302 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 UBFD1O14562 309 aaKnown RBP11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 EIF1AYO14602 144 aaKnown RBP11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 B4GAT1O43505 415 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 IGLV3-25P01717 112 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 H2BFMP0C1H6 154 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 SOX9P48436 509 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 RAB40BQ12829 278 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF542PQ5EBM4 170 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 CPOQ8IVL8 374 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 DEFB119Q8N690 84 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 IQCF1Q8N6M8 205 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 OR52E1Q8NGJ3 308 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 PLEKHA6Q9Y2H5 1048 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 GPR52Q9Y2T5 361 aa11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.62
DEPDC1-201ENST00000370966 C12orf71A8MTZ7 269 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 PROS1P07225 676 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 RAB3BP20337 219 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 NUDT1P36639 197 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 APOFQ13790 326 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 SELPLGQ14242 412 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF791Q3KP31 576 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 GAREM2Q75VX8 874 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 MAMDC2Q7Z304 686 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 TMPRSS12Q86WS5 348 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ZFP41Q8N8Y5 198 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 SAMD8Q96LT4 415 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC22A12Q96S37 553 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 EPHX3Q9H6B9 360 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ACTR10Q9NZ32 417 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 SH2B3Q9UQQ2 575 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 HCFC2Q9Y5Z7 792 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 MAP1BP46821 2468 aaKnown RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 KIAA0355O15063 1070 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 PRH1P02810 166 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 UCHL1P09936 223 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 IMPA1P29218 277 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 MFSD13AQ14CX5 517 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 TTLL10Q6ZVT0 673 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 PIAS4Q8N2W9 510 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 B3GNT7Q8NFL0 401 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 OR6C4Q8NGE1 309 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 OR9A2Q8NGT5 310 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 OR8K3Q8NH51 312 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 METTL8Q9H825 291 aaKnown RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ABCD2Q9UBJ2 740 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 PRAMEF26H0Y7S4 382 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 FMO6PO60774 539 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 UGT2B10P36537 528 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 PDX1P52945 283 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 PRPS1P60891 318 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF619Q8N2I2 560 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 VWA5B2Q8N398 1253 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 LNX2Q8N448 690 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ASCC1Q8N9N2 400 aaKnown RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 OR2T11Q8NH01 316 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 OR4K13Q8NH42 304 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 SETD6Q8TBK2 473 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 CREB3L4Q8TEY5 395 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 CD300AQ9UGN4 299 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 ABCG2Q9UNQ0 655 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 DHDHQ9UQ10 334 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 GLI3P10071 1580 aa11.2□□□□□ -0.62
DEPDC1-201ENST00000370966 A0A1W2PQL4 384 aaPredicted RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CDC40O60508 579 aaKnown RBP eCLIP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CDK4P11802 303 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 TAP2Q03519 686 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 UGT8Q16880 541 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 OTUD1Q5VV17 481 aaPredicted RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 PYHIN1Q6K0P9 492 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM239Q8WW34 195 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms