RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ANKRD33BA6NCL7 494 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ANGPT2O15123 496 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ZNF354AO60765 605 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 AK1P00568 194 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ZNF24P17028 368 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ATP6V1C1P21283 382 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 MATN1P21941 496 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ADSLP30566 484 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 LCN1P31025 176 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 KHKP50053 298 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 MEOX1P50221 254 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 POU6F2P78424 691 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 PLGLB1Q02325 96 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 GAB1Q13480 694 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 CGB2Q6NT52 195 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 NPSR1Q6W5P4 371 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 SLC22A16Q86VW1 577 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ATCAYQ86WG3 371 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ZNF227Q86WZ6 799 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 SULF2Q8IWU5 870 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 CPSF7Q8N684 471 aaKnown RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 SPPL2AQ8TCT8 520 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 HOXB13Q92826 284 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 VPS33AQ96AX1 596 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 SNRNP40Q96DI7 357 aaKnown RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 NEURL3Q96EH8 262 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 GIMAP5Q96F15 307 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 RMND5BQ96G75 393 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 SLC35A4Q96G79 324 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ADOQ96SZ5 270 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 ELAC2Q9BQ52 826 aaKnown RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 YIPF4Q9BSR8 244 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 DOHHQ9BU89 302 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 BTBD2Q9BX70 525 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 HES7Q9BYE0 225 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 OLAHQ9NV23 265 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 KLRF1Q9NZS2 232 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 B4GALT7Q9UBV7 327 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 CHCHD2Q9Y6H1 151 aaPredicted RBP12.66□□□□□ -0.38
SSR4-202ENST00000370085 EXPH5Q8NEV8 1989 aa12.66□□□□□ -0.38
SSR4-202ENST00000370085 A0A1W2PP18 115 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 ASPDHA6ND91 283 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 SLC22A2O15244 555 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 ASNA1O43681 348 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 NME6O75414 186 aaPredicted RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 IL33O95760 270 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 CCL3P10147 92 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 HPGDP15428 266 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 PPIBP23284 216 aaKnown RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 RFX3P48380 749 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 MASP1P48740 699 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 SEC24CP53992 1094 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 GYS2P54840 703 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 MLLT10P55197 1068 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 GPR85P60893 370 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 ALDH6A1Q02252 535 aaKnown RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 TLE1Q04724 770 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.381e-16■□□□□ 8.2
SSR4-202ENST00000370085 ELOAQ14241 798 aaKnown RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 DUSP5Q16690 384 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 TMEM81Q6P7N7 255 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 WDR53Q7Z5U6 358 aaPredicted RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 SLC16A11Q8NCK7 471 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 OR2M7Q8NG81 312 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 FBXO30Q8TB52 745 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 FAR1Q8WVX9 515 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 C10orf82Q8WW14 230 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 EFHD2Q96C19 240 aaPredicted RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 C16orf58Q96GQ5 468 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 ZNF597Q96LX8 424 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 SH2D2AQ9NP31 389 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 GPATCH2Q9NW75 528 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 THUMPD1Q9NXG2 353 aaKnown RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 LEF1Q9UJU2 399 aaPredicted RBP12.65□□□□□ -0.38
SSR4-202ENST00000370085 ABCG2Q9UNQ0 655 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 BSNQ9UPA5 3926 aa12.65□□□□□ -0.38
SSR4-202ENST00000370085 SVILO95425 2214 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 A0A096LPI6 279 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 PRAMEF25A6NGN4 478 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 TSPAN2O60636 221 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 UGT2B11O75310 529 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 SNRPB2P08579 225 aaKnown RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 ACP2P11117 423 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 MAP3K8P41279 467 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 HPCAP84074 193 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 MMEL1Q495T6 779 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms