RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ANXA8P13928 327 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 CSNK2A2P19784 350 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-203ENST00000369747 ITIH1P19827 911 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 LIM2P55344 173 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 MAD2L1BPQ15013 274 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-203ENST00000369747 NDUFA9Q16795 377 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 FAM214AQ32MH5 1076 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 C12orf43Q96C57 262 aaKnown RBP16.16■□□□□ 0.18
UBE3D-203ENST00000369747 NDC1Q9BTX1 674 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 KCMF1Q9P0J7 381 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 TRPC4Q9UBN4 977 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 KCND3Q9UK17 655 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 DAPP1Q9UN19 280 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 CLCA2Q9UQC9 943 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 FAM32AQ9Y421 112 aaKnown RBP16.16■□□□□ 0.18
UBE3D-203ENST00000369747 FER1L5A0AVI2 2057 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 A8MVJ9 347 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 PTGES3LE9PB15 166 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 FFAR1O14842 300 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 POLR1CO15160 346 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 SEC14L2O76054 403 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 CEACAM1P13688 526 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF10P21506 573 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 KCNJ5P48544 419 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 KHKP50053 298 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NOVA1P51513 510 aaKnown RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 PRKAG1P54619 331 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 EMP3P54852 163 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 CXCR4P61073 352 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 GPR107Q5VW38 600 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 TMEM107Q6UX40 140 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 PPP1R3BQ86XI6 285 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 ERI1Q8IV48 349 aaKnown RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 OR9Q2Q8NGE9 314 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF420Q8TAQ5 688 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 UBE2FQ969M7 185 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 MMABQ96EY8 250 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF607Q96SK3 696 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 DOK1Q99704 481 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NIPSNAP1Q9BPW8 284 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 PSD2Q9BQI7 771 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 ROGDIQ9GZN7 287 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NDOR1Q9UHB4 597 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 PCDHGA6Q9Y5G7 932 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 GPC6Q9Y625 555 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 MAU2Q9Y6X3 613 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 A0A1W2PNU3 283 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 TMEM247A6NEH6 219 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 SLC30A4O14863 429 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 SCRG1O75711 98 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 GADD45GO95257 159 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NSA2O95478 260 aaKnown RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 HMGN2P05204 90 aaKnown RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NR2F6P10588 404 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 OR1D4P47884 311 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 MAT1AQ00266 395 aaKnown RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 FUT5Q11128 374 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 IL11RAQ14626 422 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 SYT16Q17RD7 645 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 GTF2IRD2BQ6EKJ0 949 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 Q6ZPB1 254 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 RAB11FIP2Q7L804 512 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 GTF2IRD2Q86UP8 949 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 PROX1Q92786 737 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 OTUB1Q96FW1 271 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 COL21A1Q96P44 957 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NODALQ96S42 347 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 CSF3RQ99062 836 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 YIPF4Q9BSR8 244 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 STRADBQ9C0K7 418 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 NAA50Q9GZZ1 169 aaKnown RBP16.15■□□□□ 0.18
UBE3D-203ENST00000369747 LHPPQ9H008 270 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 HCN3Q9P1Z3 774 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 RHCGQ9UBD6 479 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 POFUT2Q9Y2G5 429 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 LOXL2Q9Y4K0 774 aa16.15■□□□□ 0.18
UBE3D-203ENST00000369747 SEMA7AO75326 666 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 FHP07954 510 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 NR2F1P10589 423 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 PCMT1P22061 227 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 MPIP34949 423 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 MAGEA8P43361 318 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 NUP107P57740 925 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 MC2RQ01718 297 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 LASP1Q14847 261 aaKnown RBP16.14■□□□□ 0.17
UBE3D-203ENST00000369747 C1orf189Q5VU69 101 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 BHLHB9Q6PI77 547 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 OLIG3Q7RTU3 272 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 MARCH9Q86YJ5 346 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 ENTHD1Q8IYW4 607 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 OR56A1Q8NGH5 318 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 OR4D11Q8NGI4 311 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 OR9A2Q8NGT5 310 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 MIPOL1Q8TD10 442 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-203ENST00000369747 MOAP1Q96BY2 351 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF354BQ96LW1 612 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 WFDC6Q9BQY6 131 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 DUSP21Q9H596 190 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 FBXO8Q9NRD0 319 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms