RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NDRG4Q9ULP0 352 aaKnown RBP6.45□□□□□ -1.38
CSDE1-204ENST00000369530 STUB1Q9UNE7 303 aa6.45□□□□□ -1.38
CSDE1-204ENST00000369530 PKP3Q9Y446 797 aa6.45□□□□□ -1.38
CSDE1-204ENST00000369530 GPR179Q6PRD1 2367 aa6.45□□□□□ -1.38
CSDE1-204ENST00000369530 CELSR2Q9HCU4 2923 aa6.45□□□□□ -1.38
CSDE1-204ENST00000369530 SHANK1Q9Y566 2161 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SPAARA0A1B0GVQ0 90 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CCDC182A6NF36 153 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ADAM10O14672 748 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 NRP2O60462 931 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 NIPSNAP2O75323 286 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 RBBP9O75884 186 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CCNYL3P0C7X3 344 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 TFEBP19484 476 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ETV5P41161 510 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 KCNJ5P48544 419 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SPCS3P61009 180 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 RPS27LQ71UM5 84 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 B3GNT8Q7Z7M8 397 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 OR14C36Q8NHC7 312 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PTDSS2Q9BVG9 487 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 GATA5Q9BWX5 397 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ADGRE3Q9BY15 652 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 TRIM54Q9BYV2 358 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ALX4Q9H161 411 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 WDR55Q9H6Y2 383 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CATSPERZQ9NTU4 200 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PLCXD1Q9NUJ7 323 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 COQ3Q9NZJ6 369 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SPATA2Q9UM82 520 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 TPRKBQ9Y3C4 175 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 HSPB11Q9Y547 144 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 M0R082 166 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 QSOX1O00391 747 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CD3EAPO15446 510 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LGI1O95970 557 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CHRNGP07510 517 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PRSS56P0CW18 603 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 IL1RNP18510 177 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 HTR1EP28566 365 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 AKT2P31751 481 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LIPAP38571 399 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CTSCP53634 463 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 EEFSECP57772 596 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 KCNK10P57789 538 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 TRA2AQ13595 282 aaKnown RBP eCLIP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 RPS6KA2Q15349 733 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LRRC73Q5JTD7 316 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 IGFL2Q6UWQ7 119 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LHFPL3Q86UP9 236 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PIM3Q86V86 326 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LINC01555Q8NAE3 123 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 OR8H1Q8NGG4 311 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ELP5Q8TE02 316 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PIGKQ92643 395 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 POP5Q969H6 163 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 WDR92Q96MX6 357 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SOSTQ9BQB4 213 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SAV1Q9H4B6 383 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ACTR10Q9NZ32 417 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SAMHD1Q9Y3Z3 626 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 IGLV3-12A0A075B6K2 115 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 A0A1W2PRQ8 180 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 SUPT3HB4E1H0 165 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PSMD9O00233 223 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 BTN3A3O00478 584 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 HCRTR1O43613 425 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 AKAP8O43823 692 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 KLK8O60259 260 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CCNB2O95067 398 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CD36P16671 472 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 EPORP19235 508 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ATP5F1P24539 256 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 MPSTP25325 297 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 AOAHP28039 575 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ATXN3P54252 364 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 BCL2L1Q07817 233 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 MAP4K2Q12851 820 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 EXOSC2Q13868 293 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LARS2Q15031 903 aaKnown RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 MEP1AQ16819 746 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 LIPMQ5VYY2 423 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 MARCH9Q86YJ5 346 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 CENPLQ8N0S6 344 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 STPG2Q8N412 459 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 D2HGDHQ8N465 521 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 UXS1Q8NBZ7 420 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 OR1M1Q8NGA1 313 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 OR4L1Q8NH43 312 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 HEXDCQ8WVB3 486 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 TMEM159Q96B96 161 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 NEU1Q99519 415 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 ALG2Q9H553 416 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 MARCH4Q9P2E8 410 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-204ENST00000369530 BTNL2Q9UIR0 455 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 PCDHB1Q9Y5F3 818 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 GON4LQ3T8J9 2241 aa6.44□□□□□ -1.38
CSDE1-204ENST00000369530 A0A1W2PP18 115 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 C2orf74A8MZ97 194 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms