RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 A0A1W2PRB8 838 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 CARNS1A5YM72 827 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 ANKRD34CP0C6C1 535 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 DRD5P21918 477 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 MMP15P51511 669 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 DGCR2P98153 550 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 SNTB2Q13425 540 aaKnown RBP15.23■□□□□ 0.03
CHD1L-203ENST00000369259 PDE7AQ13946 482 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 SFRP5Q5T4F7 317 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 SLC22A10Q63ZE4 541 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 KLBQ86Z14 1044 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 TTC9BQ8N6N2 239 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 TRMT10AQ8TBZ6 339 aaKnown RBP15.23■□□□□ 0.03
CHD1L-203ENST00000369259 FANK1Q8TC84 345 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 C19orf43Q9BQ61 176 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 WFDC6Q9BQY6 131 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 ZNF649Q9BS31 505 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 C20orf85Q9H1P6 137 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 SLC35C2Q9NQQ7 365 aa15.23■□□□□ 0.03
CHD1L-203ENST00000369259 A0A1W2PRQ8 180 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 GSAPA4D1B5 854 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 ANKDD1BA6NHY2 528 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 MPTX1A8MV57 137 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CACNB4O00305 520 aaPredicted RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 RNF13O43567 381 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 GBAP04062 536 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CDH11P55287 796 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 RPS13P62277 151 aaKnown RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 DUSP4Q13115 394 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 UAP1L1Q3KQV9 507 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 ENTPD8Q5MY95 495 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 B3GNTL1Q67FW5 361 aaPredicted RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 HIST2H2AA3Q6FI13 130 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 SFXN4Q6P4A7 337 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 SMARCD3Q6STE5 483 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 Q6ZTK2 550 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 IQCHQ86VS3 1027 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 LRRC56Q8IYG6 542 aaPredicted RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CNOT9Q92600 299 aaKnown RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CLP1Q92989 425 aaKnown RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 TMEM19Q96HH6 336 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 NKIRAS2Q9NYR9 191 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 A4GNTQ9UNA3 340 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 ANXA2P2A6NMY6 339 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 MCRIP1C9JLW8 97 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 PRSS44E7EML9 344 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 TEX46H3BTG2 121 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CBX7O95931 251 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 ADRB1P08588 477 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 ATP5A1P25705 553 aaKnown RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 SHC1P29353 583 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 RPL3P39023 403 aaKnown RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 KCNJ5P48544 419 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 SLC11A2P49281 568 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 SGSHP51688 502 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 B4GALNT1Q00973 533 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CDKN3Q16667 212 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 PABPC1L2AQ5JQF8 200 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 C1orf94Q6P1W5 598 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 TECPR1Q7Z6L1 1165 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 MRGPREQ86SM8 312 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 LINC00471Q8N535 108 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 HORMAD2Q8N7B1 307 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 LCORQ96JN0 433 aaPredicted RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 FAIM2Q9BWQ8 316 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 EGLN3Q9H6Z9 239 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 A4GALTQ9NPC4 353 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 PIPOXQ9P0Z9 390 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 GPR160Q9UJ42 338 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 FCF1Q9Y324 198 aaKnown RBP15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CHST2Q9Y4C5 530 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 CCDC88CQ9P219 2028 aa15.22■□□□□ 0.03
CHD1L-203ENST00000369259 TRABD2BA6NFA1 517 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 AGAP14A8MT82 685 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 ARHGEF33A8MVX0 844 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 LINC01387J3KSC0 135 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 M0QZ92 97 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 NFKBIEO00221 500 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 SIGLEC6O43699 453 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 PRAF2O60831 178 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 UBL3O95164 117 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 WNT1P04628 370 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 UQCRC2P22695 453 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 HNF1BP35680 557 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 MAZP56270 477 aaKnown RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 MRPS6P82932 125 aaKnown RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 LSM11P83369 360 aaKnown RBP eCLIP15.21■□□□□ 0.031e-7■■■■■ 32.8
CHD1L-203ENST00000369259 PITPNAQ00169 270 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 HLXQ14774 488 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 ZNF322Q6U7Q0 402 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 ZNF454Q8N9F8 522 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 ATAD1Q8NBU5 361 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 OR8K3Q8NH51 312 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 TEX47Q8TBZ9 253 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 MRPS24Q96EL2 167 aaKnown RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 UROC1Q96N76 676 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 SLC38A3Q99624 504 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 FNDC11Q9BVV2 318 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms