RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PACRGLQ8N7B6 248 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 MFSD2AQ8NA29 543 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 OR4K2Q8NGD2 314 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CREB3L4Q8TEY5 395 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ROPN1LQ96C74 230 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SLC7A6OSQ96CW6 309 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SLC25A51Q9H1U9 297 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ESRP2Q9H6T0 727 aaKnown RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 GOLGA2P5Q9HBQ8 144 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RNF19AQ9NV58 838 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 KCNIP1Q9NZI2 227 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 PPT2Q9UMR5 302 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 POMPQ9Y244 141 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 KLF13Q9Y2Y9 288 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RPS10-NUDT3A0A1W2PQS6 291 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 LCHNA4D1U4 455 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 LINC01553A4QN01 128 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 FOXO6A8MYZ6 492 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 MSI1O43347 362 aaKnown RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 ENTPD6O75354 484 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 ZFAND5O76080 213 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 ALX3O95076 343 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 MT-ND1P03886 318 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 F3P13726 295 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 RPS10P46783 165 aaKnown RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 FHITP49789 147 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 BPIFB3P59826 476 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 GABREP78334 506 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 PTP4A2Q12974 167 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 COL9A3Q14050 684 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 C4orf17Q53FE4 359 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 KIAA0930Q6ICG6 404 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 LCLAT1Q6UWP7 414 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 POGLUT1Q8NBL1 392 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 OR56B2PQ8NGI1 322 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 ARRDC3Q96B67 414 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF583Q96ND8 569 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 CD180Q99467 661 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 MED18Q9BUE0 208 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 STRA6Q9BX79 667 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 TAS2R16Q9NYV7 291 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 SLC17A7Q9P2U7 560 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 NOCTQ9UK39 431 aaKnown RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 PLEKHM1Q9Y4G2 1056 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 C13orf42A0A1B0GVH6 325 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 GRXCR1A8MXD5 290 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 LIASO43766 372 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 ITGA10O75578 1167 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 MT-ATP6P00846 226 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 CALCBP10092 127 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 KDELR1P24390 212 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 DNASE1P24855 282 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 RAD52P43351 418 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 CDKN1CP49918 316 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 TAS2R39P59534 338 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 NRG1Q02297 640 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 SP140Q13342 867 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 POU4F3Q15319 338 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 CPSF6Q16630 551 aaKnown RBP eCLIP8.21□□□□□ -1.09
SYNE1-206ENST00000367253 COL28A1Q2UY09 1125 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 BEX5Q5H9J7 111 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 LRRC38Q5VT99 294 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 AGAP7PQ5VUJ5 663 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 GAREM2Q75VX8 874 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 SLC30A8Q8IWU4 369 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 CRYBG2Q8N1P7 616 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 LILRB2Q8N423 598 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 EXD3Q8N9H8 876 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 MBD3L1Q8WWY6 194 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 MAP6Q96JE9 813 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 AGAP4Q96P64 663 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 KCNJ16Q9NPI9 418 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 B4GALT6Q9UBX8 382 aa8.21□□□□□ -1.09
SYNE1-206ENST00000367253 H0YAE9 185 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 UBFD1O14562 309 aaKnown RBP8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ERI3O43414 337 aaKnown RBP8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ATG12O94817 140 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 CD247P20963 164 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PLA2G16P53816 162 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 TLE4Q04727 773 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ALKBH1Q13686 389 aaKnown RBP8.21□□□□□ -1.1
SYNE1-206ENST00000367253 NPTX1Q15818 432 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF836Q6ZNA1 936 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PIGXQ8TBF5 258 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PHOSPHO1Q8TCT1 267 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ASB11Q8WXH4 323 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 UBE2FQ969M7 185 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 WACQ9BTA9 647 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ITPAQ9BY32 194 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 XPNPEP1Q9NQW7 623 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 DNAJB9Q9UBS3 223 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PRELID3BQ9Y3B1 194 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ATRXP46100 2492 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 A0A1W2PPM1 405 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 OR6C6A6NF89 314 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 AGAP5A6NIR3 686 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 DRGXA6NNA5 263 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 DLGAP1O14490 977 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 NDUFS4O43181 175 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 RPP14O95059 124 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms