RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PGK1P00558 417 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 SDC1P18827 310 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 FUT3P21217 361 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZP3P21754 424 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 UGT1A3P35503 534 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 WNT4P56705 351 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 TEFQ10587 303 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 RAB35Q15286 201 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 OTPQ5XKR4 325 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 UFSP1Q6NVU6 142 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 TIFABQ6ZNK6 161 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 AMZ2Q86W34 360 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 CENPSQ8N2Z9 138 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 OR10H4Q8NGA5 316 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 SNX21Q969T3 373 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 FAM104AQ969W3 186 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 ELSPBP1Q96BH3 223 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 EXOSC3Q9NQT5 275 aaKnown RBP2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 MBD2Q9UBB5 411 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF221Q9UK13 617 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 PDE10AQ9Y233 779 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZMYM6O95789 1325 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 RLFQ13129 1914 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 ARHGAP23Q9P227 1491 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 A0A0U1RQG5 324 aaPredicted RBP2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 TMEM89A2RUT3 159 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 RTN2O75298 545 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 GNSP15586 552 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF18P17022 549 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 MDKP21741 143 aaPredicted RBP2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 RPA1P27694 616 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 TMOD1P28289 359 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 BCL2L1Q07817 233 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 IL17AQ16552 155 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 CAMK4Q16566 473 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 SPATA46Q5T0L3 261 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 MEDAGQ5VYS4 303 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 ANKRD23Q86SG2 305 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 YRDCQ86U90 279 aaKnown RBP2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 RANBP3LQ86VV4 465 aaPredicted RBP2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 IQCA1Q86XH1 822 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 CSNK1A1LQ8N752 337 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF397Q8NF99 534 aaPredicted RBP2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 TMEM245Q9H330 911 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 Q9H3A6 140 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 DCAF13Q9NV06 445 aaKnown RBP2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 ELOVL2Q9NXB9 296 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 USP6P35125 1406 aa2.93□□□□□ -1.94
RNU4-28P-201ENST00000364739 ARHGAP21Q5T5U3 1957 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 METP08581 1390 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 TRBV7-9A0A0J9YWB2 115 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 A0A0U1RRA0 63 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 WWP2O00308 870 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 PDXKO00764 312 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 ARPC1BO15143 372 aaKnown RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 STK17BO94768 372 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZCCHC18P0CG32 403 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 CASP3P42574 277 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 GPC3P51654 580 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 HNRNPFP52597 415 aaKnown RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 RPS6P62753 249 aaKnown RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 GFPT1Q06210 699 aaPredicted RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 PRR4Q16378 134 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 HFEQ30201 348 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 BEND6Q5SZJ8 279 aaPredicted RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 TMEM179BQ7Z7N9 219 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 PARGQ86W56 976 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 GPBP1Q86WP2 473 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 C10orf53Q8N6V4 93 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 PHYHIPQ92561 330 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 NOL4LQ96MY1 436 aaPredicted RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 CCSER1Q9C0I3 900 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 ABCG8Q9H221 673 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 EHD1Q9H4M9 534 aa2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 FAM124BQ9H5Z6 455 aaPredicted RBP2.92□□□□□ -1.94
RNU4-28P-201ENST00000364739 DHX29Q7Z478 1369 aaKnown RBP2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 NPIPA2E9PIF3 369 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 IMPA2O14732 288 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 TOXO94900 526 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 GOSR1O95249 250 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 IGKV3-11P04433 115 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 IGFBP1P08833 259 aaPredicted RBP2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 H2AFZP0C0S5 128 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF853P0CG23 659 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 NF2P35240 595 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 CAV2P51636 162 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 PPP1R8Q12972 351 aaKnown RBP2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 CARTPTQ16568 116 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 HACD2Q6Y1H2 254 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 CCDC91Q7Z6B0 441 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 C18orf25Q96B23 403 aaPredicted RBP2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 CCDC51Q96ER9 411 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 TSPAN18Q96SJ8 248 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 CBWD1Q9BRT8 395 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 FZR1Q9UM11 496 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 DUSP12Q9UNI6 340 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 DHRS7Q9Y394 339 aa2.91□□□□□ -1.94
RNU4-28P-201ENST00000364739 TEX264Q9Y6I9 313 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms