RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 EFR3AQ14156 821 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 CT45A2Q5DJT8 189 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 ZNF628Q5EBL2 1059 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 LARP4Q71RC2 724 aaKnown RBP eCLIP19.07■□□□□ 0.64
CD47-202ENST00000361309 UBQLNLQ8IYU4 475 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 CCDC116Q8IYX3 515 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 C1orf52Q8N6N3 182 aaKnown RBP19.07■□□□□ 0.64
CD47-202ENST00000361309 ZNF675Q8TD23 568 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 KAT2AQ92830 837 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 RAB17Q9H0T7 212 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 BRF2Q9HAW0 419 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 TMCO1Q9UM00 188 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 COL6A5A8TX70 2615 aa19.07■□□□□ 0.64
CD47-202ENST00000361309 TRIM64A6NGJ6 449 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 TRIM64BA6NI03 449 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 SMIM24O75264 130 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 BCAS2O75934 225 aaPredicted RBP19.06■□□□□ 0.64
CD47-202ENST00000361309 POU2F1P14859 743 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 CCKARP32238 428 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 UGT2B10P36537 528 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 KIR2DL2P43627 348 aaPredicted RBP19.06■□□□□ 0.64
CD47-202ENST00000361309 TRA2BP62995 288 aaKnown RBP19.06■□□□□ 0.64
CD47-202ENST00000361309 SIRPAP78324 504 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 LETMD1Q6P1Q0 360 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 NPSR1Q6W5P4 371 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 ZNF550Q7Z398 422 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 GBP7Q8N8V2 638 aaPredicted RBP19.06■□□□□ 0.64
CD47-202ENST00000361309 OR4K17Q8NGC6 315 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 RNF138Q8WVD3 245 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 HS3ST6Q96QI5 342 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 HBEGFQ99075 208 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 XPR1Q9UBH6 696 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 SNX6Q9UNH7 406 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 USF3Q68DE3 2245 aa19.06■□□□□ 0.64
CD47-202ENST00000361309 PRR14LQ5THK1 2151 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 ESRRBO95718 433 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 RPS17P08708 135 aaKnown RBP19.05■□□□□ 0.64
CD47-202ENST00000361309 PEPDP12955 493 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 TSPAN8P19075 237 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 PNLIPRP2P54317 469 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 DSCR4P56555 118 aaPredicted RBP19.05■□□□□ 0.64
CD47-202ENST00000361309 OR9A2Q8NGT5 310 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 PPP1R14CQ8TAE6 165 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 FIG4Q92562 907 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 EFHD2Q96C19 240 aaPredicted RBP19.05■□□□□ 0.64
CD47-202ENST00000361309 ZC3HAV1LQ96H79 300 aaKnown RBP19.05■□□□□ 0.64
CD47-202ENST00000361309 ZNF845Q96IR2 970 aaPredicted RBP19.05■□□□□ 0.64
CD47-202ENST00000361309 MARK4Q96L34 752 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 VSTM2LQ96N03 204 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 PIGQQ9BRB3 760 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 SLC39A3Q9BRY0 314 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 NMRK1Q9NWW6 199 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 ELOVL5Q9NYP7 299 aa19.05■□□□□ 0.64
CD47-202ENST00000361309 H0YC42 278 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 C16orf97H3BN30 126 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 OTCP00480 354 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 KCNJ5P48544 419 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 CDH13P55290 713 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 TPD52P55327 224 aaPredicted RBP19.04■□□□□ 0.64
CD47-202ENST00000361309 CLDN15P56746 228 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 ERCC6LQ2NKX8 1250 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 C20orf204Q6ZNR8 217 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 MEIOBQ8N635 442 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 OR4N2Q8NGD1 307 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 ZNF483Q8TF39 744 aaPredicted RBP19.04■□□□□ 0.64
CD47-202ENST00000361309 ERP27Q96DN0 273 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 DSN1Q9H410 356 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 FOLH1BQ9HBA9 442 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 PPP4R1LQ9P1A2 415 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 VPS29Q9UBQ0 182 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 ATRQ13535 2644 aa19.04■□□□□ 0.64
CD47-202ENST00000361309 INAFM1C9JVW0 142 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 CGAP01215 116 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 CTAGE8P0CG41 777 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 HK1P19367 917 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 LOXP28300 417 aaPredicted RBP19.03■□□□□ 0.64
CD47-202ENST00000361309 SUCLG1P53597 346 aaKnown RBP19.03■□□□□ 0.64
CD47-202ENST00000361309 UBAP2Q5T6F2 1119 aaKnown RBP19.03■□□□□ 0.64
CD47-202ENST00000361309 SLC44A2Q8IWA5 706 aaPredicted RBP19.03■□□□□ 0.64
CD47-202ENST00000361309 CTAGE4Q8IX94 777 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 FADS6Q8N9I5 356 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 ZNF610Q8N9Z0 462 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 EXOSC8Q96B26 276 aaKnown RBP19.03■□□□□ 0.64
CD47-202ENST00000361309 PINK1Q9BXM7 581 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 ZNF225Q9UK10 706 aa19.03■□□□□ 0.64
CD47-202ENST00000361309 FBN1P35555 2871 aaKnown RBP19.03■□□□□ 0.64
CD47-202ENST00000361309 CHD3Q12873 2000 aaKnown RBP19.02■□□□□ 0.64
CD47-202ENST00000361309 EMC8O43402 210 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 SCO2O43819 266 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 OR4F21O95013 312 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 IL3P08700 152 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 EVI2BP34910 448 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 MAGEA12P43365 314 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 EEFSECP57772 596 aaKnown RBP19.02■□□□□ 0.64
CD47-202ENST00000361309 PSPHP78330 225 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 PPP2R2BQ00005 443 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 TSNAXIP1Q2TAA8 658 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 TCHHL1Q5QJ38 904 aaPredicted RBP19.02■□□□□ 0.64
CD47-202ENST00000361309 RAET1LQ5VY80 246 aa19.02■□□□□ 0.64
CD47-202ENST00000361309 ANKRD34AQ69YU3 496 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms