RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 WASH6PQ9NQA3 447 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 MIEF1Q9NQG6 463 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 IRAK4Q9NWZ3 460 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 AHSPQ9NZD4 102 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SH3GLB1Q9Y371 365 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DSPPQ9NZW4 1301 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 PRUNE2Q8WUY3 3088 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 TRBC2A0A5B9 178 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 HEPACAM2A8MVW5 462 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 BOLA2-SMG1P6H3BVE0 249 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 B4GALT2O60909 372 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 GADD45GO95257 159 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 GASTP01350 101 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 GSSP48637 474 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 LIM2P55344 173 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF234Q14588 700 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 EIF4HQ15056 248 aaKnown RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 INAQ16352 499 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SYT16Q17RD7 645 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 MSMPQ1L6U9 139 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 METRNLQ641Q3 311 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 KLHL17Q6TDP4 642 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SLC46A3Q7Z3Q1 461 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 AMZ2Q86W34 360 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 OR8H2Q8N162 312 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 C2orf73Q8N5S3 287 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 OR5K2Q8NHB8 316 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 PSMA8Q8TAA3 256 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SLC38A5Q8WUX1 472 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 OR5P2Q8WZ92 322 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 TFGQ92734 400 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZHX1-C8orf76Q96EF9 292 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF764Q96H86 408 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 NLNQ9BYT8 704 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 NXF2Q9GZY0 626 aaKnown RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ABCG4Q9H172 646 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZBTB20Q9HC78 741 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 AMBNQ9NP70 447 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 PRDM8Q9NQV8 689 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 GIN1Q9NXP7 522 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 GPR83Q9NYM4 423 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SPATA7Q9P0W8 599 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF69Q9UC07 566 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 CHD9Q3L8U1 2897 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 A0A1W2PPV9 198 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZAR1LA6NP61 321 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SEMA7AO75326 666 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 CCNB2O95067 398 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 STSP08842 583 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ADORA3P0DMS8 318 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 TGM1P22735 817 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SOAT1P35610 550 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 P2RY2P41231 377 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 IDH2P48735 452 aaKnown RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 CCR5P51681 352 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 RAP2BP61225 183 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 FBXO43Q4G163 708 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 PNCKQ6P2M8 343 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 CEACAM20Q6UY09 585 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 HORMAD2Q8N7B1 307 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 MINDY2Q8NBR6 621 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF675Q8TD23 568 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SNX33Q8WV41 574 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 PEX11GQ96HA9 241 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZFYVE19Q96K21 471 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 COL21A1Q96P44 957 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 MAPKAP1Q9BPZ7 522 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 DCSTAMPQ9H295 470 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 DSN1Q9H410 356 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 NT5DC2Q9H857 520 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF556Q9HAH1 456 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SIRT3Q9NTG7 399 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-202ENST00000360642 DEC1Q9P2X7 70 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 RAB23Q9ULC3 237 aa6.87□□□□□ -1.31
CLCN3-202ENST00000360642 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 AIREO43918 545 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 MFN2O95140 757 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ADRA2AP08913 450 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CHMP24386 653 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GADD45AP24522 165 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GRK5P34947 590 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 HSD17B2P37059 387 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GATA4P43694 442 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 NUDT6P53370 316 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ST3GAL4Q11206 333 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GANABQ14697 944 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TRIM16LQ309B1 348 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FRMPD2BQ6IN97 320 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 C19orf48Q6RUI8 117 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PAGE2Q7Z2X7 111 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 AQP11Q8NBQ7 271 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GPR32P1Q8NGA4 272 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 F2RL3Q96RI0 385 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ACAT2Q9BWD1 397 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CDCA4Q9BXL8 241 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 MMP27Q9H306 513 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 NMNAT1Q9HAN9 279 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms