RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 RNF11Q9Y3C5 154 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 FANCGO15287 622 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 EMC8O43402 210 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 BTN1A1Q13410 526 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SHFQ7M4L6 423 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 OR51J1Q9H342 316 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 DVL2O14641 736 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 POU3F4P49335 361 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 STEAP4Q687X5 459 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GAREM2Q75VX8 874 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PIM3Q86V86 326 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SMAP2Q8WU79 429 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 DAZLQ92904 295 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TRMT2BQ96GJ1 504 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 UBXN10Q96LJ8 280 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PINK1Q9BXM7 581 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PLEKHJ1Q9NW61 149 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 C1orf226A1L170 272 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 NFKBIEO00221 500 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RTCAO00442 366 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SOCS5O75159 536 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 STSP08842 583 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF92Q03936 586 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SEZ6LQ9BYH1 1024 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PITHD1Q9GZP4 211 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GALPQ9UBC7 116 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SCN8AQ9UQD0 1980 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 HTR3BO95264 441 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MEX3BQ6ZN04 569 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM200AQ86VY9 491 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 FAM58AQ8N1B3 248 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 FAM109AQ8N4B1 249 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MRPL15Q9P015 296 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 NDRG2Q9UN36 371 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 UPK3BL1B0FP48 263 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 UPK3BL2E5RIL1 263 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GAPDHSO14556 408 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 NUPL2O15504 423 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RBMS3Q6XE24 437 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RSPRY1Q96DX4 576 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SLC38A8A6NNN8 435 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 IL1AP01583 271 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ARSBP15848 533 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TAS2R46P59540 309 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 FAM214AQ32MH5 1076 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF574Q6ZN55 896 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 C1orf127Q8N9H9 656 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SEMA6CQ9H3T2 930 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GPR83Q9NYM4 423 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 EVPLQ92817 2033 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 H3BMQ9 156 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 KCNK2O95069 426 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 EPOP01588 193 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GLO1Q04760 184 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ARL16Q0P5N6 197 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PLA2G7Q13093 441 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 CHRNA6Q15825 494 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RHEBL1Q8TAI7 183 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 FAM122AQ96E09 287 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 COG8Q96MW5 612 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MED6O75586 246 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GMPRP36959 345 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 KEAP1Q14145 624 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 DUSP7Q16829 419 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 KIAA0895LQ68EN5 471 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TSTD1Q8NFU3 115 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 OR4M1Q8NGD0 313 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SACM1LQ9NTJ5 587 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 OR5H15A6NDH6 313 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 OR5H14A6NHG9 310 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 OR5H1A6NKK0 313 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 HBG1P69891 147 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 HBG2P69892 147 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PLCXD2Q0VAA5 305 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ECM1Q16610 540 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TIFABQ6ZNK6 161 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GPR137CQ8N3F9 429 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MINDY1Q8N5J2 469 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 OR13C4Q8NGS5 318 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 CERS4Q9HA82 394 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ANKRD31Q8N7Z5 1873 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 LOC102723532A0A0G2JNH3 316 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 GLOD5A6NK44 160 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 CCL23P55773 120 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 CMPK2Q5EBM0 449 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 LRRC28Q86X40 367 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 C2CD4AQ8NCU7 369 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 ST6GALNAC4Q9H4F1 302 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 TNFSF4P23510 183 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RAP2BP61225 183 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 DLX2Q07687 328 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PAN3Q58A45 887 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 LANCL3Q6ZV70 420 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 THAP7Q9BT49 309 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RRAGCQ9HB90 399 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 COQ3Q9NZJ6 369 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 PPP3CBP16298 524 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms