RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 ZBP1Q9H171 429 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-202ENST00000359526 TRAPPC13A5PLN9 417 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-202ENST00000359526 AK4P27144 223 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-202ENST00000359526 CLRN1P58418 232 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 ACTBP60709 375 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 ACTG1P63261 375 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 CCINQ13939 588 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 ELOAQ14241 798 aaKnown RBP11.59□□□□□ -0.55
DNMT1-202ENST00000359526 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 PLAG1Q6DJT9 500 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 TMEM205Q6UW68 189 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 TMEM107Q6UX40 140 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 FAM109AQ8N4B1 249 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 SH3YL1Q96HL8 342 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-202ENST00000359526 NMNAT1Q9HAN9 279 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-202ENST00000359526 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 B4GALT7Q9UBV7 327 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 KCNN3Q9UGI6 736 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 GPR45Q9Y5Y3 372 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 USP3Q9Y6I4 520 aa11.59□□□□□ -0.55
DNMT1-202ENST00000359526 HSPA12AO43301 675 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 JMJD7P0C870 316 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 HLA-EP13747 358 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 STK19P49842 368 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CHRFAM7AQ494W8 412 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 COMMD6Q7Z4G1 85 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 TMPRSS12Q86WS5 348 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 APIPQ96GX9 242 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 ACTRT3Q9BYD9 372 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 SYT4Q9H2B2 425 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 KLHL9Q9P2J3 617 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 MYH11P35749 1972 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 LYRM1O43325 122 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 RBMS1P29558 406 aaKnown RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 SLC5A2P31639 672 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 LRIT3Q3SXY7 679 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 LRRC37A5PQ49AS3 106 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CCDC58Q4VC31 144 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 ALG10Q5BKT4 473 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 TMEM173Q86WV6 379 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 TP53INP2Q8IXH6 220 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 ARFGAP1Q8N6T3 406 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 ZNF300Q96RE9 604 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 HOXD1Q9GZZ0 328 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 TMEM185BQ9H7F4 350 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 MCCC2Q9HCC0 563 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 GSKIPQ9P0R6 139 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 FBXL3Q9UKT7 428 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 ZNF705EA8MWA4 302 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CASC3O15234 703 aaKnown RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 PRAF2O60831 178 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CXCL10P02778 98 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 PGCP20142 388 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 GMPRP36959 345 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 PGGT1BP53609 377 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CASP6P55212 293 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 ODF4Q2M2E3 257 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 SNAPC3Q92966 411 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 IL17CQ9P0M4 197 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 GLS2Q9UI32 602 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 POU2F2P09086 479 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 RNH1P13489 461 aaKnown RBP11.58□□□□□ -0.56
DNMT1-202ENST00000359526 PRKCAP17252 672 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 TAZQ16635 292 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CRTC1Q6UUV9 634 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 SYT14Q8NB59 555 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 SLC7A13Q8TCU3 470 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 FAM46BQ96A09 425 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 CACNA1SQ13698 1873 aa11.58□□□□□ -0.56
DNMT1-202ENST00000359526 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 A0A1W2PQL4 384 aaPredicted RBP11.57□□□□□ -0.56
DNMT1-202ENST00000359526 H7C417 338 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 IL4RP24394 825 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 RIDAP52758 137 aaKnown RBP11.57□□□□□ -0.56
DNMT1-202ENST00000359526 COL28A1Q2UY09 1125 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 FAM122CQ6P4D5 195 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 MFSD6LQ8IWD5 586 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 ZNF283Q8N7M2 679 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 SGIP1Q9BQI5 828 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 C7orf50Q9BRJ6 194 aaKnown RBP11.57□□□□□ -0.56
DNMT1-202ENST00000359526 TIMM29Q9BSF4 260 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 DPH7Q9BTV6 452 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 PPA2Q9H2U2 334 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 CWH43Q9H720 699 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 A0A1B0GUL6 1792 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 LOC285095A0A1B0GVY8 99 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 SORBS2O94875 1100 aaKnown RBP11.57□□□□□ -0.56
DNMT1-202ENST00000359526 PLGP00747 810 aaPredicted RBP11.57□□□□□ -0.56
DNMT1-202ENST00000359526 CHMP24386 653 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 RGS19P49795 217 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 FXYD6P3P58550 94 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 GNMTQ14749 295 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 NR0B2Q15466 257 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 SPATC1Q76KD6 591 aa11.57□□□□□ -0.56
DNMT1-202ENST00000359526 BEST3Q8N1M1 668 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms