RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SIX1Q15475 284 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 DGLUCYQ7Z3D6 616 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 OR9A1PQ8NGU1 263 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ISG20Q96AZ6 181 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 FEVQ99581 238 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ABCG4Q9H172 646 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 DIMT1Q9UNQ2 313 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CRYBG1Q9Y4K1 1723 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TRAV6A0A075B6T7 132 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 GPR25O00155 361 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NFKBIEO00221 500 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SOX15O60248 233 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NAT2P11245 290 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 POU6F2P78424 691 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 GRIN2CQ14957 1233 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TTC9Q92623 222 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TSPAN10Q9H1Z9 355 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 UTS2RQ9UKP6 389 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CLCA3PQ9Y6N3 262 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TP53I11O14683 189 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CD63P08962 238 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ACP2P11117 423 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ALDH3B1P43353 468 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SLC10A6Q3KNW5 377 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TSSK4Q6SA08 328 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 IL34Q6ZMJ4 242 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF598Q86UK7 904 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CADM2Q8N3J6 435 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 MS4A4EQ96PG1 132 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TM6SF2Q9BZW4 377 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SAP130Q9H0E3 1048 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 GJE1A6NN92 205 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM62Q0P6H9 643 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 LBX2Q6XYB7 198 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SEMA6DQ8NFY4 1073 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 OR5H6Q8NGV6 325 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PCED1BQ96HM7 432 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SYT11Q9BT88 431 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TMED9Q9BVK6 235 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 AMBNQ9NP70 447 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NUMBLQ9Y6R0 609 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 RREB1Q92766 1687 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SLC16A8O95907 504 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 MAGP20916 626 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SELENOVP59797 346 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SELENOWP63302 87 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 UGCGQ16739 394 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 WDR26Q9H7D7 661 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 DNAJC27Q9NZQ0 273 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 DNAJC15Q9Y5T4 150 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 DDX60Q8IY21 1712 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 C5P01031 1676 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NUMBP49757 651 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 UBE2MP61081 183 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 FBXL22Q6P050 247 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SCIMPQ6UWF3 145 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 USP50Q70EL3 339 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TCEANCQ8N8B7 351 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ZSCAN4Q8NAM6 433 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SLC30A7Q8NEW0 376 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 OR9I1Q8NGQ6 314 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM203Q969S6 136 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 C17orf62Q9BQA9 187 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PATZ1Q9HBE1 687 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 WDR45Q9Y484 360 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TISP43B9A030 160 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NUDT21O43809 227 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SLC7A9P82251 487 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CDK3Q00526 305 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ELAVL3Q14576 367 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 BCL2L15Q5TBC7 163 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 GTF2H4Q92759 462 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NUS1Q96E22 293 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PCYT2Q99447 389 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 LRRK2Q5S007 2527 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PIAS1O75925 651 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 KCNK2O95069 426 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 VIPP01282 170 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ARSBP15848 533 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ITPKBP27987 946 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ELK4P28324 431 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CRABP1P29762 137 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 IRF9Q00978 393 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 MAP2K5Q13163 448 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 UBE2UQ5VVX9 321 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 FAM156AQ8NDB6 213 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 THAP4Q8WY91 577 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 C14orf119Q9NWQ9 140 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SLC22A23A1A5C7 686 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 C1orf226A1L170 272 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 BDKRB2P30411 391 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SERTAD2Q14140 314 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 MS4A13Q5J8X5 152 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PARP16Q8N5Y8 322 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF321PQ8N8H1 164 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 LIN7BQ9HAP6 207 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TEX10Q9NXF1 929 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms