RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SPTA1P02549 2419 aa16.46■□□□□ 0.23
PDLIM7-202ENST00000355841 TRAV17A0A0B4J275 112 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 UGT2B11O75310 529 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 PPM1BO75688 479 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 IGKV1D-16P01601 117 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 HOXB9P17482 250 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 GPR85P60893 370 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 KLRB1Q12918 225 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 NTRK2Q16620 822 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 BICRALQ6AI39 1079 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 ZCCHC12Q6PEW1 402 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 FIGNL1Q6PIW4 674 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 HPS6Q86YV9 775 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 COX18Q8N8Q8 333 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 Q8NA96 180 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 ADAMTS15Q8TE58 950 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 ZFP90Q8TF47 636 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 RAB8BQ92930 207 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 TPT1P8Q9HAU6 139 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 MRGBPQ9NV56 204 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 FBXO34Q9NWN3 711 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 VAPAQ9P0L0 249 aa16.45■□□□□ 0.22
PDLIM7-202ENST00000355841 PRRC2CQ9Y520 2896 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 A0A0G2JMM0 328 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 A0A1W2PPB8 328 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 A0A1W2PRS3 328 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 KIR3DP1A8MWS1 328 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 KCNH1O95259 989 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 SP1P08047 785 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 ZCCHC18P0CG32 403 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 OR12D1P0DN82 309 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 CD46P15529 392 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 ADSLP30566 484 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 PIGAP37287 484 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 MRPS22P82650 360 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 CYLC2Q14093 348 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 CYP27C1Q4G0S4 372 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 PRAMEF20Q5VT98 475 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 DLEU7Q6UYE1 221 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 RTL4Q6ZR62 310 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 GALNTL5Q7Z4T8 443 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 HORMAD2Q8N7B1 307 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 PSD4Q8NDX1 1056 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 BCAS4Q8TDM0 211 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 TSPEARQ8WU66 669 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 PNPLA2Q96AD5 504 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 TMEM125Q96AQ2 219 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 C5orf34Q96MH7 638 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 PIGUQ9H490 435 aa16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 CHCHD2Q9Y6H1 151 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-202ENST00000355841 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 SLC22A2O15244 555 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 TSPAN2O60636 221 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 UNC5CO95185 931 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 IL12BP29460 328 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 KRT20P35900 424 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 NFYCQ13952 458 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 DECR1Q16698 335 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 LRIF1Q5T3J3 769 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 REP15Q6BDI9 236 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 SLC25A25Q6KCM7 469 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 OLIG3Q7RTU3 272 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 ZAR1Q86SH2 424 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 DHDDSQ86SQ9 333 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 GPALPP1Q8IXQ4 340 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 LSM14AQ8ND56 463 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 SGCZQ96LD1 299 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 COL21A1Q96P44 957 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 STACQ99469 402 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 SLC39A3Q9BRY0 314 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 SH2D2AQ9NP31 389 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 DUSP22Q9NRW4 184 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 DEPPQ9NTK1 212 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 FLRT3Q9NZU0 649 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 KCNK2O95069 426 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 COX4I1P13073 169 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 TMED10P49755 219 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 MVDP53602 400 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 PMP22Q01453 160 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 CAPRIN1Q14444 709 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 MAPRE2Q15555 327 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 MMEL1Q495T6 779 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 CCDC197Q8NCU1 140 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 XAGE5Q8WWM1 108 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 DIO2Q92813 273 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 HGDQ93099 445 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 SCMH1Q96GD3 660 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 LRRC37BQ96QE4 947 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 NODALQ96S42 347 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 BTBD2Q9BX70 525 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 IKZF5Q9H5V7 419 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 TIMMDC1Q9NPL8 285 aa16.43■□□□□ 0.22
PDLIM7-202ENST00000355841 TRBV5-3A0A0A0MS03 114 aa16.42■□□□□ 0.22
PDLIM7-202ENST00000355841 TTC36A6NLP5 189 aa16.42■□□□□ 0.22
PDLIM7-202ENST00000355841 CAPN14A8MX76 684 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms