RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SIRT4Q9Y6E7 314 aaPredicted RBP17.77■□□□□ 0.44
PRPF39-201ENST00000355765 SLC28A2O43868 658 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 ATP1B2P14415 290 aaPredicted RBP17.77■□□□□ 0.44
PRPF39-201ENST00000355765 KCNJ5P48544 419 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 ZNF33BQ06732 778 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 HSPB3Q12988 150 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 PDE7AQ13946 482 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 SFRP5Q5T4F7 317 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 HBMQ6B0K9 141 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 TTLQ8NG68 377 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 MOSPD2Q8NHP6 518 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 ELMOD3Q96FG2 381 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 GPR62Q9BZJ7 368 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 ABCG4Q9H172 646 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 MRPS18AQ9NVS2 196 aaKnown RBP17.77■□□□□ 0.44
PRPF39-201ENST00000355765 SESN1Q9Y6P5 492 aa17.77■□□□□ 0.44
PRPF39-201ENST00000355765 DOCK6Q96HP0 2047 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 MMP20O60882 483 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 UQCRC2P22695 453 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 RBMS1P29558 406 aaKnown RBP17.77■□□□□ 0.43
PRPF39-201ENST00000355765 PTSQ03393 145 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 SLBPQ14493 270 aaKnown RBP eCLIP17.77■□□□□ 0.43
PRPF39-201ENST00000355765 SYPL1Q16563 259 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 TCTE1Q5JU00 501 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 SLC27A4Q6P1M0 643 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 C3P1Q6ZMU1 363 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 TRPV1Q8NER1 839 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 TRMT10AQ8TBZ6 339 aaKnown RBP17.77■□□□□ 0.43
PRPF39-201ENST00000355765 ADAMTS14Q8WXS8 1223 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 ACOT12Q8WYK0 555 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 SAV1Q9H4B6 383 aaPredicted RBP17.77■□□□□ 0.43
PRPF39-201ENST00000355765 MAN2C1Q9NTJ4 1040 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 POMT2Q9UKY4 750 aa17.77■□□□□ 0.43
PRPF39-201ENST00000355765 VWA8A3KMH1 1905 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 PLXNB3Q9ULL4 1909 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 A0A0B4J203 849 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 CASC3O15234 703 aaKnown RBP17.76■□□□□ 0.43
PRPF39-201ENST00000355765 EFCAB14O75071 495 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 PLATP00750 562 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 URODP06132 367 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 DRD2P14416 443 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
PRPF39-201ENST00000355765 MMP12P39900 470 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 NHLRC3Q5JS37 347 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 CST9Q5W186 159 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 SLC30A6Q6NXT4 461 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 GLB1LQ6UWU2 654 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 ALKAL2Q6UX46 152 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 KLHL1Q9NR64 748 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 KLHL42Q9P2K6 505 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 CPNE7Q9UBL6 633 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 KIF25Q9UIL4 384 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 PLXND1Q9Y4D7 1925 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 SLC16A5O15375 505 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 FZD7O75084 574 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 LPLP06858 475 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 PTNP21246 168 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 IMPA1P29218 277 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 THBS2P35442 1172 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 RFX3P48380 749 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 ATRAIDQ6UW56 229 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 TFAP2EQ6VUC0 442 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 C17orf107Q6ZR85 190 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 CBARPQ8N350 705 aaPredicted RBP17.76■□□□□ 0.43
PRPF39-201ENST00000355765 YIPF5Q969M3 257 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 KCNK12Q9HB15 430 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 CFAP97Q9P2B7 532 aa17.76■□□□□ 0.43
PRPF39-201ENST00000355765 IRGMA1A4Y4 181 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 PI15O43692 258 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 GATBO75879 557 aaKnown RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 RGS9O75916 674 aaPredicted RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 WNT1P04628 370 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 ACP5P13686 325 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 CXCL2P19875 107 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 RPS7P62081 194 aaKnown RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SLC25A35Q3KQZ1 300 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 CLLU1OSQ5K130 101 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 PLEKHS1Q5SXH7 462 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 Q6ZTK2 550 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 LSM14AQ8ND56 463 aaKnown RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 FCRL4Q96PJ5 515 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SLC38A2Q96QD8 506 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SARGQ9BW04 601 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SLC9B1P1A6NJY1 282 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 RNF13O43567 381 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 B4GALT2O60909 372 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 UBXN7O94888 489 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 XPAP23025 273 aaPredicted RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SMIM11AP58511 58 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 HECTD3Q5T447 861 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SFRP4Q6FHJ7 346 aaPredicted RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SLCO4C1Q6ZQN7 724 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 PRSS45Q7RTY3 260 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 OR5D16Q8NGK9 328 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 RPLP0P6Q8NHW5 317 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 PTP4A1Q93096 173 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 SCAMP4Q969E2 229 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 WDR89Q96FK6 387 aaPredicted RBP17.75■□□□□ 0.43
PRPF39-201ENST00000355765 TDP1Q9NUW8 608 aa17.75■□□□□ 0.43
PRPF39-201ENST00000355765 CBLCQ9ULV8 474 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms