RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 DPAGT1Q9H3H5 408 aa10.73□□□□□ -0.69
CAPN9-202ENST00000354537 DDX31Q9H8H2 851 aaKnown RBP10.73□□□□□ -0.69
CAPN9-202ENST00000354537 GLTPQ9NZD2 209 aa10.73□□□□□ -0.69
CAPN9-202ENST00000354537 CACNG2Q9Y698 323 aa10.73□□□□□ -0.69
CAPN9-202ENST00000354537 GTPBP1O00178 669 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 RNF13O43567 381 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SNAPC5O75971 98 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 RAF1P04049 648 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ANXA3P12429 323 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 F8A1P23610 371 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ACSL1P33121 698 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SOX18P35713 384 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 PITPNBP48739 271 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 CSTF1Q05048 431 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 NFE2L1Q14494 772 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 FCN2Q15485 313 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 FAM205BPQ63HN1 556 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 VASNQ6EMK4 673 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 RAET1GQ6H3X3 334 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 LUZP2Q86TE4 346 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SLC39A11Q8N1S5 342 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SPRYD4Q8WW59 207 aaPredicted RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 EXOSC8Q96B26 276 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 AMDHD1Q96NU7 426 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SORCS2Q96PQ0 1159 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 F2RL3Q96RI0 385 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 OSGEPL1Q9H4B0 414 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 EMC3Q9P0I2 261 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SMIM30A4D0T7 59 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 KLF4O43474 513 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 PDGFAP04085 211 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 POLR2CP19387 275 aaPredicted RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 CD79BP40259 229 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 CCR8P51685 355 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 TAS2R41P59536 307 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 RGS1Q08116 209 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 TRMT11Q7Z4G4 463 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ABI3BPQ7Z7G0 1075 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 TMEM25Q86YD3 366 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 GID4Q8IVV7 300 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 DCUN1D3Q8IWE4 304 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ZFP41Q8N8Y5 198 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ZNF680Q8NEM1 530 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 DIO2Q92813 273 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 AHCYL2Q96HN2 611 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 MAP6Q96JE9 813 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 MRGPRX3Q96LB0 322 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 GFM1Q96RP9 751 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 SECISBP2Q96T21 854 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 FAIM2Q9BWQ8 316 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ABCG4Q9H172 646 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 GLIPR2Q9H4G4 154 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 ZFP64Q9NPA5 681 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 LHX9Q9NQ69 397 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 INPP5EQ9NRR6 644 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 IMP3Q9NV31 184 aaKnown RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 BABAM2Q9NXR7 383 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 CALML5Q9NZT1 146 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 H2AFY2Q9P0M6 372 aaPredicted RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 RABL2AQ9UBK7 228 aaPredicted RBP10.72□□□□□ -0.69
CAPN9-202ENST00000354537 TRPC4Q9UBN4 977 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 TNFRSF10DQ9UBN6 386 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 RABL2BQ9UNT1 228 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 GPR52Q9Y2T5 361 aa10.72□□□□□ -0.69
CAPN9-202ENST00000354537 NUP210Q8TEM1 1887 aaPredicted RBP10.71□□□□□ -0.69
CAPN9-202ENST00000354537 LRRTM2O43300 516 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 VEGFDO43915 354 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 NCR1O76036 304 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 PAPLNO95428 1278 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 CXCL10P02778 98 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 CHRM4P08173 479 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ELNP15502 786 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 TM4SF4P48230 202 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 PGGHGQ32M88 737 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 TOR2AQ5JU69 321 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 CDC73Q6P1J9 531 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 SMARCD3Q6STE5 483 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 RRM2BQ7LG56 351 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ANKRD53Q8N9V6 530 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 OR4M2Q8NGB6 313 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 OR56A1Q8NGH5 318 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ACOT11Q8WXI4 607 aaPredicted RBP10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ABCG5Q9H222 651 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 OR52A5Q9H2C5 316 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 FN3KQ9H479 309 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ENAMQ9NRM1 1142 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ZCCHC3Q9NUD5 404 aaKnown RBP10.71□□□□□ -0.69
CAPN9-202ENST00000354537 PTGFRNQ9P2B2 879 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 ENTPD4Q9Y227 616 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 SPEF1Q9Y4P9 236 aa10.71□□□□□ -0.69
CAPN9-202ENST00000354537 TUBAL3A6NHL2 446 aa10.7□□□□□ -0.7
CAPN9-202ENST00000354537 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
CAPN9-202ENST00000354537 NDUFS4O43181 175 aa10.7□□□□□ -0.7
CAPN9-202ENST00000354537 TMPRSS11DO60235 418 aa10.7□□□□□ -0.7
CAPN9-202ENST00000354537 LZTS3O60299 673 aaPredicted RBP10.7□□□□□ -0.7
CAPN9-202ENST00000354537 POP7O75817 140 aaKnown RBP10.7□□□□□ -0.7
CAPN9-202ENST00000354537 APOL3O95236 402 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms