RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CHEK2O96017 543 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 TP53P04637 393 aaPredicted RBP10.21□□□□□ -0.78
RTN3-204ENST00000354497 PRDX6P30041 224 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 DIO3P55073 304 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 SRYQ05066 204 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 SLBPQ14493 270 aaKnown RBP eCLIP10.21□□□□□ -0.78
RTN3-204ENST00000354497 EFTUD2Q15029 972 aaKnown RBP eCLIP10.21□□□□□ -0.783e-9■■■■□ 23.3
RTN3-204ENST00000354497 WIPI1Q5MNZ9 446 aaPredicted RBP10.21□□□□□ -0.78
RTN3-204ENST00000354497 C6orf10Q5SRN2 563 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 VASNQ6EMK4 673 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 PLXDC2Q6UX71 529 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 LYPD8Q6UX82 237 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 C20orf204Q6ZNR8 217 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 CHAC2Q8WUX2 184 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 GIMAP5Q96F15 307 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 HES6Q96HZ4 224 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 C7orf26Q96N11 449 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 QRFPRQ96P65 431 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 FAM111AQ96PZ2 611 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 SERINC2Q96SA4 455 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 CADM1Q9BY67 442 aaKnown RBP10.21□□□□□ -0.78
RTN3-204ENST00000354497 REXO4Q9GZR2 422 aaKnown RBP10.21□□□□□ -0.78
RTN3-204ENST00000354497 EHD1Q9H4M9 534 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 CALHM2Q9HA72 323 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 YAE1D1Q9NRH1 226 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 ZNF226Q9NYT6 803 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 RSL24D1Q9UHA3 163 aaKnown RBP10.21□□□□□ -0.78
RTN3-204ENST00000354497 DAPP1Q9UN19 280 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 KCNE2Q9Y6J6 123 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 CEPT1Q9Y6K0 416 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 GOLGA8QA0A0J9YX86 632 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 GOLGA8OA6NCC3 632 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 LRIT2A6NDA9 550 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 ANKDD1BA6NHY2 528 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 DEFB108AA8MXU0 73 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 GOLGA8NF8WBI6 632 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 GOLGA8RI6L899 631 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 SIAH2O43255 324 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 ITM2AO43736 263 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 TRIM3O75382 744 aaPredicted RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 STAMBPO95630 424 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 C1QAP02745 245 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 SLCO1A2P46721 670 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 ALDH3B2P48448 385 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 CLK1P49759 484 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 CDKN2DP55273 166 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 IL2P60568 153 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 DSTNP60981 165 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 CDK16Q00536 496 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 TIAL1Q01085 375 aaKnown RBP eCLIP10.2□□□□□ -0.78
RTN3-204ENST00000354497 KCNJ8Q15842 424 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 RBM20Q5T481 1227 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 C6orf183Q5T699 404 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 BICRALQ6AI39 1079 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 CGB2Q6NT52 195 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 IDO2Q6ZQW0 420 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 LIAT1Q6ZQX7 453 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 TRMT10CQ7L0Y3 403 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 SLC29A4Q7RTT9 530 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 ADAMTSL2Q86TH1 951 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 CAND1Q86VP6 1230 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 OR4N5Q8IXE1 308 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 DND1Q8IYX4 353 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 SLC15A4Q8N697 577 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 BBOF1Q8ND07 529 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 NUBPLQ8TB37 319 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 TRUB1Q8WWH5 349 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 SLC44A1Q8WWI5 657 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 PPWD1Q96BP3 646 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 ERP27Q96DN0 273 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 ZC3HAV1LQ96H79 300 aaKnown RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 SENP5Q96HI0 755 aaPredicted RBP10.2□□□□□ -0.78
RTN3-204ENST00000354497 WFIKKN1Q96NZ8 548 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 GNRHR2Q96P88 292 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 EGFL8Q99944 293 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 PIGQQ9BRB3 760 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 MED18Q9BUE0 208 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 GSX2Q9BZM3 304 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 PIGMQ9H3S5 423 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 ZDHHC18Q9NUE0 388 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 RAB26Q9ULW5 256 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 SPACA6W5XKT8 324 aa10.2□□□□□ -0.78
RTN3-204ENST00000354497 MPDZO75970 2070 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 ZCWPW2A0A1B0GU75 182 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 ESYT3A0FGR9 886 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 FAM172BPA6NC97 362 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 HRKO00198 91 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 KPNA4O00629 521 aaPredicted RBP10.19□□□□□ -0.78
RTN3-204ENST00000354497 TP53I11O14683 189 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 GNB5O14775 395 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 BET1O15155 118 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PHF1O43189 567 aaPredicted RBP10.19□□□□□ -0.78
RTN3-204ENST00000354497 ZNF254O75437 659 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 KRT36O76013 467 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 HPNP05981 417 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 FBXO45P0C2W1 286 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 C1GALT1C1LP0DN25 315 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 STX2P32856 288 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TTKP33981 857 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms