RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DCAF10Q5QP82 559 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 NDUFAF5Q5TEU4 345 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 ZNF691Q5VV52 312 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 KDM4DQ6B0I6 523 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 REEP3Q6NUK4 255 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 FAHD1Q6P587 224 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 ANGPTL8Q6UXH0 198 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 RD3Q7Z3Z2 195 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 VN1R4Q7Z5H5 301 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 THAP5Q7Z6K1 395 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 VTCN1Q7Z7D3 282 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 ASPGQ86U10 573 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 SATL1Q86VE3 508 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 RNF130Q86XS8 419 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 ARMC8Q8IUR7 673 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 C8orf59Q8N0T1 100 aaPredicted RBP7.67□□□□□ -1.18
CD44-205ENST00000352818 ZNF786Q8N393 782 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 FDCSPQ8NFU4 85 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 NFKBIDQ8NI38 313 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 MIPOL1Q8TD10 442 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 FBLIM1Q8WUP2 373 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 GEMIN6Q8WXD5 167 aaKnown RBP7.67□□□□□ -1.18
CD44-205ENST00000352818 HDAC2Q92769 488 aaKnown RBP7.67□□□□□ -1.18
CD44-205ENST00000352818 MAL2Q969L2 176 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 ZNF566Q969W8 418 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 EXOSC8Q96B26 276 aaKnown RBP7.67□□□□□ -1.18
CD44-205ENST00000352818 TAMM41Q96BW9 452 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 DGCR14Q96DF8 476 aaKnown RBP7.67□□□□□ -1.18
CD44-205ENST00000352818 TM4SF19Q96DZ7 209 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 OR2A14Q96R47 310 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 C17orf62Q9BQA9 187 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 AMBRA1Q9C0C7 1298 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 GRIP2Q9C0E4 1043 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 REEP1Q9H902 201 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 SMURF2Q9HAU4 748 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 CHST11Q9NPF2 352 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 SLC35C2Q9NQQ7 365 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 SEMA3GQ9NS98 782 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 CES1P1Q9UKY3 287 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 PCDHGB3Q9Y5G1 929 aa7.67□□□□□ -1.18
CD44-205ENST00000352818 SNRNP200O75643 2136 aaKnown RBP7.67□□□□□ -1.18
CD44-205ENST00000352818 MYOCOSA0A1B0GUC4 107 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ARRDC5A6NEK1 342 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 URADA6NGE7 173 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ARGFXA6NJG6 315 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 C2orf74A8MZ97 194 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 hCG_2039718K7EN88 272 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ZNF701M0R085 212 aaPredicted RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 KIF1CO43896 1103 aaKnown RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 HS6ST1O60243 411 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 AIFM1O95831 613 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 RECKO95980 971 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SERPIND1P05546 499 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 FESP07332 822 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 IFI6P09912 130 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SLC35G6P0C7Q6 338 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SMIM10L1P0DMW3 83 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ATP6V1B1P15313 513 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ALDH4A1P30038 563 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 TTKP33981 857 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 RYKP34925 604 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ALDH9A1P49189 494 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 KHKP50053 298 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 CDK9P50750 372 aaKnown RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 BLKP51451 505 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PLA2G16P53816 162 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SQSTM1Q13501 440 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 GPR18Q14330 331 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 CLPPQ16740 277 aaPredicted RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 CNPY1Q3B7I2 92 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PRAMEF8Q5VWM4 474 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PRAMEF7Q5VXH5 474 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SLC48A1Q6P1K1 146 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 BHLHB9Q6PI77 547 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SLC30A9Q6PML9 568 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 CEACAM20Q6UY09 585 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 GKN2Q86XP6 184 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PLD3Q8IV08 490 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 TRIM48Q8IWZ4 208 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SAMD14Q8IZD0 417 aaPredicted RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 OFCC1Q8IZS5 231 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 HS3ST5Q8IZT8 346 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ESX1Q8N693 406 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 HORMAD2Q8N7B1 307 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ACOT4Q8N9L9 421 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 AVL9Q8NBF6 648 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ACBD4Q8NC06 268 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SETD9Q8NE22 299 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 OR4E2Q8NGC2 313 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 OR56A1Q8NGH5 318 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 OR5AK3PQ8NH89 298 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 CCL4L1Q8NHW4 92 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 RASSF5Q8WWW0 418 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 NRGNQ92686 78 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SMIM10Q96HG1 83 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SLC35G5Q96KT7 338 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 AMDHD1Q96NU7 426 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 MUS81Q96NY9 551 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 OR2A5Q96R48 311 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms