RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NIPAL4Q0D2K0 466 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 RAB31Q13636 194 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 NTRK2Q16620 822 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 CDRT4Q8N9R6 151 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 ZNF610Q8N9Z0 462 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 HEMK1Q9Y5R4 338 aaPredicted RBP21.9■■□□□ 1.1
NPAS3-201ENST00000346562 CLIC3O95833 236 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 ZNF888P0CJ79 500 aaPredicted RBP21.9■■□□□ 1.1
NPAS3-201ENST00000346562 RBPJQ06330 500 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 MTFR2Q6P444 385 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 NRMQ8IXM6 262 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 HAVCR2Q8TDQ0 301 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 MGLLQ99685 303 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 DUSP23Q9BVJ7 150 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 H7C2Y5 167 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 HOXD13P35453 343 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 TSPAN33Q86UF1 283 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 ZNF761Q86XN6 746 aaPredicted RBP21.9■■□□□ 1.1
NPAS3-201ENST00000346562 ZNF160Q9HCG1 818 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 PPP1R3DO95685 299 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 LCTLQ6UWM7 567 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 ANKRD26Q9UPS8 1709 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 UGDHO60701 494 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 CER1O95813 267 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 CHRNB4P30926 498 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 STEAP4Q687X5 459 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.9■■□□□ 1.1
NPAS3-201ENST00000346562 PTGDR2Q9Y5Y4 395 aa21.9■■□□□ 1.1
NPAS3-201ENST00000346562 A0A1W2PPW3 197 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 BLACEA4D250 179 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 SHOXO15266 292 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 HSD17B7P56937 341 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 TAP2Q03519 686 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 COMMD6Q7Z4G1 85 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 ACOT13Q9NPJ3 140 aa21.89■■□□□ 1.1
NPAS3-201ENST00000346562 NDUFB2O95178 105 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 P2RY2P41231 377 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 DCP2Q8IU60 420 aaKnown RBP21.89■■□□□ 1.09
NPAS3-201ENST00000346562 CMTM1Q8IZ96 169 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 OR4K3Q96R72 315 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 MEGF11A6BM72 1044 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 ETFAP13804 333 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 MTNR1AP48039 350 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 CAMLGP49069 296 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 ZNF704Q6ZNC4 412 aaPredicted RBP21.89■■□□□ 1.09
NPAS3-201ENST00000346562 MARVELD2Q8N4S9 558 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 CSNK2A3Q8NEV1 391 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 SACM1LQ9NTJ5 587 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 EMP2P54851 167 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 DEFB133Q30KQ1 61 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 Q6ZSR6 202 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 PCDHA9Q9Y5H5 950 aa21.89■■□□□ 1.09
NPAS3-201ENST00000346562 EEF1E1-BLOC1S5C9J1V9 151 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 IFNA4P05014 189 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 ZNF14P17017 642 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CHMP24386 653 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CERS1P27544 350 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CDKN2CP42773 168 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 TRIM73Q86UV7 250 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CHST14Q8NCH0 376 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 FAM118AQ9NWS6 357 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PCDHB10Q9UN67 800 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 POU3F2P20265 443 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 HTR3AP46098 478 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 TMEM135Q86UB9 458 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 WDSUB1Q8N9V3 476 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CASD1Q96PB1 797 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 GDE1Q9NZC3 331 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 STSP08842 583 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 SFTPDP35247 375 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 SNTB2Q13425 540 aaKnown RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 KIR2DS3Q14952 304 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 S100PBPQ96BU1 408 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 DNAJB11Q9UBS4 358 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PCTPQ9UKL6 214 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 SLC7A7Q9UM01 511 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 SLC6A14Q9UN76 642 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PTRH2Q9Y3E5 179 aaKnown RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PRKXP51817 358 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PITX1P78337 314 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 SLC10A2Q12908 348 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PDZD3Q86UT5 571 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 MAELQ96JY0 434 aaKnown RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 B3GALT1Q9Y5Z6 326 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CYBAP13498 195 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 ITGB7P26010 798 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 TNFRSF4P43489 277 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 GK3PQ14409 553 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 ENPP6Q6UWR7 440 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CLECL1Q8IZS7 167 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 TEPSINQ96N21 525 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PAAF1Q9BRP4 392 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 PITHD1Q9GZP4 211 aaPredicted RBP21.88■■□□□ 1.09
NPAS3-201ENST00000346562 KLHL9Q9P2J3 617 aa21.88■■□□□ 1.09
NPAS3-201ENST00000346562 CRTAPO75718 401 aaPredicted RBP21.87■■□□□ 1.09
NPAS3-201ENST00000346562 AMY2AP04746 511 aa21.87■■□□□ 1.09
NPAS3-201ENST00000346562 LPAL2Q16609 132 aa21.87■■□□□ 1.09
NPAS3-201ENST00000346562 ZNF705EA8MWA4 302 aaPredicted RBP21.87■■□□□ 1.09
NPAS3-201ENST00000346562 TXNDC15Q96J42 360 aa21.87■■□□□ 1.09
NPAS3-201ENST00000346562 EMC3Q9P0I2 261 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms