RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MRPS10P82664 201 aaKnown RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TUBB3Q13509 450 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 PLEKHS1Q5SXH7 462 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 CBLL1Q75N03 491 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 CEP68Q76N32 757 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 NRMQ8IXM6 262 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 FBXO15Q8NCQ5 510 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 C2CD4CQ8TF44 421 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 CNIH4Q9P003 139 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 HSFX1Q9UBD0 423 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 PLAGL1Q9UM63 463 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 CSNK1G3Q9Y6M4 447 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 MEIS3P1A6NDR6 274 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 I6L893 689 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 GABRPO00591 440 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SLC16A6O15403 523 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 AHSA1O95433 338 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TM4SF1P30408 202 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 OC90Q02509 493 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 PRKCZQ05513 592 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SLX4IPQ5VYV7 408 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 FAM122BQ7Z309 247 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 ANGPTL6Q8NI99 470 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SYNPRQ8TBG9 265 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SMPDL3AQ92484 453 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 AKIP1Q9NQ31 210 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 RXFP3Q9NSD7 469 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 NDRG2Q9UN36 371 aaKnown RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 ANKRD12Q6UB98 2062 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3DA0A087WVF3 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3IA0A087WXS9 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3EA0A087X179 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3KA0A087X1G2 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3FA6NER0 549 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3LB9A6J9 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TCRBP04435 133 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3HP0C7X1 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 HAPLN1P10915 354 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 HTR3AP46098 478 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3GQ6DHY5 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3CQ6IPX1 549 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 ENPP7Q6UWV6 458 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 C17orf107Q6ZR85 190 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TBC1D3Q8IZP1 549 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 OR5T1Q8NG75 326 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 METTL21AQ8WXB1 218 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SOCS4Q8WXH5 440 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SAMD11Q96NU1 681 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 RAB11FIP5Q9BXF6 653 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 KATNBL1Q9H079 304 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 IFT22Q9H7X7 185 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SEC61A2Q9H9S3 476 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 UFSP2Q9NUQ7 469 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 A0A0D9SG52 128 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 ZDHHC11BP0C7U3 371 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 RPS25P62851 125 aaKnown RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 HTR4Q13639 388 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 MFSD13AQ14CX5 517 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 GDPD4Q6W3E5 623 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 TMEM150AQ86TG1 271 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 OR9A1PQ8NGU1 263 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 MOAP1Q96BY2 351 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SAMD8Q96LT4 415 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SORBS1Q9BX66 1292 aaKnown RBP11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SLC6A16Q9GZN6 736 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SAP130Q9H0E3 1048 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 SRMSQ9H3Y6 488 aa11.49□□□□□ -0.57
COL12A1-202ENST00000345356 M0R3H8 397 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 LATS1O95835 1130 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 HLA-DMAP28067 261 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 S100A11P31949 105 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 NFATC4Q14934 902 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ARHGAP11AQ6P4F7 1023 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 KIAA1324Q6UXG2 1013 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 RANBP10Q6VN20 620 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ZER1Q7Z7L7 766 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 OR2AP1Q8NGE2 309 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 OR52E2Q8NGJ4 325 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 FAM46BQ96A09 425 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 KIAA1143Q96AT1 154 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SLC25A18Q9H1K4 315 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 FZD7O75084 574 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 LIPCP11150 499 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 CDKN1CP49918 316 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF527Q8NB42 609 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SUMF2Q8NBJ7 301 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 NAXEQ8NCW5 288 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 HUS1BQ8NHY5 278 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 MSLNLQ96KJ4 702 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ORAI3Q9BRQ5 295 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 TCEAL2Q9H3H9 227 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 APMAPQ9HDC9 416 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 MRPS23Q9Y3D9 190 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 AKR7A2O43488 359 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 FAM163BP0C2L3 166 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms