RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TRHRP34981 398 aaPredicted RBP12.63□□□□□ -0.39
CDC42-202ENST00000344548 RAD23AP54725 363 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 DCST2Q5T1A1 773 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 TTC23Q5W5X9 447 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 CDRT4Q8N9R6 151 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 FAM181AQ8N9Y4 354 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 CHDHQ8NE62 594 aaPredicted RBP12.63□□□□□ -0.39
CDC42-202ENST00000344548 OR52P1PQ8NH57 321 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 CNIH3Q8TBE1 160 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 PHF10Q8WUB8 498 aaKnown RBP12.63□□□□□ -0.39
CDC42-202ENST00000344548 FUZQ9BT04 418 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 CNPPD1Q9BV87 410 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 ZNF350Q9GZX5 532 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 CLK4Q9HAZ1 481 aaKnown RBP12.63□□□□□ -0.39
CDC42-202ENST00000344548 ENAMQ9NRM1 1142 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 SLC22A11Q9NSA0 550 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 ERVK-19Q9WJR5 959 aa12.63□□□□□ -0.39
CDC42-202ENST00000344548 CLDN4O14493 209 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 BCKDKO14874 412 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 CPNE6O95741 557 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 CLPSP04118 112 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 ALPPP05187 535 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 ALOX5P09917 674 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 ITGAMP11215 1152 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 PNLIPP16233 465 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 RFX3P48380 749 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 NPRL3Q12980 569 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 FGD3Q5JSP0 725 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 COLEC12Q5KU26 742 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 PRAMEF8Q5VWM4 474 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 PRAMEF7Q5VXH5 474 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 SLC23A3Q6PIS1 610 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 THAP5Q7Z6K1 395 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 MEX3DQ86XN8 651 aaKnown RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 CARFQ8N187 725 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 ZNF555Q8NEP9 628 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 RASSF5Q8WWW0 418 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 DHRS1Q96LJ7 313 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 PTCHD1Q96NR3 888 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 A8MUA0 341 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 BMP10O95393 424 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 THY1P04216 161 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 IGFBP1P08833 259 aaPredicted RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 CBLP22681 906 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 STT3AP46977 705 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 EMP3P54852 163 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 HSD17B7P56937 341 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 RPP38P78345 283 aaKnown RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 PIGFQ07326 219 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 GNA13Q14344 377 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 MINDY4Q4G0A6 757 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 ZNF836Q6ZNA1 936 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 SHISA6Q6ZSJ9 500 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 C8orf59Q8N0T1 100 aaPredicted RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 COX18Q8N8Q8 333 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 AQP11Q8NBQ7 271 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 PTPMT1Q8WUK0 201 aaPredicted RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 HOXB13Q92826 284 aaPredicted RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 TMIGD2Q96BF3 282 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 VSTM2LQ96N03 204 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 DGAT2Q96PD7 388 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 LMF1Q96S06 567 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 PINK1Q9BXM7 581 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 FOLH1BQ9HBA9 442 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 APMAPQ9HDC9 416 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 DUSP22Q9NRW4 184 aa12.62□□□□□ -0.39
CDC42-202ENST00000344548 NDRG4Q9ULP0 352 aaKnown RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 MRPS33Q9Y291 106 aaKnown RBP12.62□□□□□ -0.39
CDC42-202ENST00000344548 NKX2-2O95096 273 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 IFNA16P05015 189 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 PRG2P13727 222 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 SKP1P63208 163 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 ZNF155Q12901 538 aaPredicted RBP12.61□□□□□ -0.39
CDC42-202ENST00000344548 SQSTM1Q13501 440 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 ANGPT1Q15389 498 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 NADK2Q4G0N4 442 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 GPR135Q8IZ08 494 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 IFI44Q8TCB0 444 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 OR6C1Q96RD1 312 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 ARHGDIGQ99819 225 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 DPYSL5Q9BPU6 564 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 RHNO1Q9BSD3 238 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 NDC1Q9BTX1 674 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
CDC42-202ENST00000344548 CTSFQ9UBX1 484 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 SERTAD3Q9UJW9 196 aa12.61□□□□□ -0.39
CDC42-202ENST00000344548 ZNF443Q9Y2A4 671 aaPredicted RBP12.61□□□□□ -0.39
CDC42-202ENST00000344548 HEMK1Q9Y5R4 338 aaPredicted RBP12.61□□□□□ -0.39
CDC42-202ENST00000344548 AGAP5A6NIR3 686 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 M0R129 80 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 UGT2B17O75795 530 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 CCNB2O95067 398 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 KCNK2O95069 426 aa12.6□□□□□ -0.39
CDC42-202ENST00000344548 H1F0P07305 194 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms