RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 B3GALT1Q9Y5Z6 326 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 CNOT1A5YKK6 2376 aaKnown RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 SPAARA0A1B0GVQ0 90 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 MEN1O00255 615 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 CXCR6O00574 342 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 CREG1O75629 220 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF182P17025 639 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 CD247P20963 164 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 NT5EP21589 574 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 PRKAG1P54619 331 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 DCDP81605 110 aaKnown RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 STX4Q12846 297 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 MAP4K2Q12851 820 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 ITGADQ13349 1161 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 EXOSC6Q5RKV6 272 aaKnown RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 TTC23Q5W5X9 447 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 CEACAM20Q6UY09 585 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF517Q6ZMY9 492 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 QSOX2Q6ZRP7 698 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 RAB11FIP2Q7L804 512 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 OR5D16Q8NGK9 328 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 STT3BQ8TCJ2 826 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 FIG4Q92562 907 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 RAB8BQ92930 207 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 OTUB1Q96FW1 271 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 PTCHD1Q96NR3 888 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 YIPF4Q9BSR8 244 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 SLC7A5P2Q9GIP4 190 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 VN1R1Q9GZP7 353 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 TMEM38AQ9H6F2 299 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 PTGFRNQ9P2B2 879 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 C19orf53Q9UNZ5 99 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 KCNE3Q9Y6H6 103 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 A0A087WV62 115 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 TEX51A0A1B0GUA7 166 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 TMEM229AB2RXF0 380 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 CPNE3O75131 537 aaKnown RBP13.69□□□□□ -0.22
CXCL12-201ENST00000343575 CBX7O95931 251 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 HBQ1P09105 142 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 ARAFP10398 606 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 EIF2B2P49770 351 aaKnown RBP13.69□□□□□ -0.22
CXCL12-201ENST00000343575 TMEM53Q6P2H8 277 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 SHISA6Q6ZSJ9 500 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 SZRD1Q7Z422 152 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 WDR53Q7Z5U6 358 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-201ENST00000343575 THAP5Q7Z6K1 395 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 GALNT10Q86SR1 603 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 IGFN1Q86VF2 1251 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 PRSS58Q8IYP2 241 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 FAM86B1Q8N7N1 296 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 OR56A1Q8NGH5 318 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 TAMM41Q96BW9 452 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 MOAP1Q96BY2 351 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 VMP1Q96GC9 406 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 MESP1Q9BRJ9 268 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 SPATA9Q9BWV2 254 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 ING2Q9H160 280 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 OR51I1Q9H343 314 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 MMACHCQ9Y4U1 282 aa13.69□□□□□ -0.22
CXCL12-201ENST00000343575 PTPRZ1P23471 2315 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 VSTM2BA6NLU5 285 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 DLL1O00548 723 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 DEAF1O75398 565 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 IFI6P09912 130 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 ZGLP1P0C6A0 271 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 HOXB6P17509 224 aaKnown RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 MATN1P21941 496 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 S100A1P23297 94 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 PCGF2P35227 344 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 ALDH3A2P51648 485 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 DSTNP60981 165 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 PRR5P85299 388 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 FUT5Q11128 374 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 VEZF1Q14119 521 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 EXOSC7Q15024 291 aaKnown RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 GCNT6Q5T4J0 391 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 GTF2IRD2BQ6EKJ0 949 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 ERICH5Q6P6B1 374 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 FAM199XQ6PEV8 388 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 OVCH1Q7RTY7 1134 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 GTF2IRD2Q86UP8 949 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 PARP8Q8N3A8 854 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 PIK3C3Q8NEB9 887 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 OR52E4Q8NGH9 312 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 MAGEE2Q8TD90 523 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 PTPMT1Q8WUK0 201 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 POP5Q969H6 163 aaKnown RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 RBM18Q96H35 190 aaKnown RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 SLC35G5Q96KT7 338 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 LRFN5Q96NI6 719 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-201ENST00000343575 SPRY4Q9C004 299 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 C3orf14Q9HBI5 128 aa13.68□□□□□ -0.22
CXCL12-201ENST00000343575 TCRBV16S1A1N1A0A5B0 115 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms