RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TP53INP1Q96A56 240 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 ERP27Q96DN0 273 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 NODALQ96S42 347 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 METTL7AQ9H8H3 244 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 Q9N2J8 555 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 GPATCH2Q9NW75 528 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 FBXO34Q9NWN3 711 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 SLAMF8Q9P0V8 285 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 ANAPC2Q9UJX6 822 aa12.15□□□□□ -0.46
TUBD1-202ENST00000340993 SCO2O43819 266 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 PPM1BO75688 479 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 SLITRK5O94991 958 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 IGKV1D-16P01601 117 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 ALOX5P09917 674 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 DRD5P21918 477 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 MATN1P21941 496 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 PLGLB1Q02325 96 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 PAGE3Q5JUK9 113 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 COX20Q5RI15 118 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 OR5M10Q6IEU7 315 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 ZAR1Q86SH2 424 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 POU5F2Q8N7G0 328 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 GATSQ8NAP1 163 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 TMEM178AQ8NBL3 297 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 OR56A1Q8NGH5 318 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 CCDC115Q96NT0 180 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 OR7D2Q96RA2 312 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 NSRP1Q9H0G5 558 aaKnown RBP12.14□□□□□ -0.47
TUBD1-202ENST00000340993 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 SACM1LQ9NTJ5 587 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 VPS4AQ9UN37 437 aa12.14□□□□□ -0.47
TUBD1-202ENST00000340993 CHCHD2Q9Y6H1 151 aaPredicted RBP12.14□□□□□ -0.47
TUBD1-202ENST00000340993 ICOSLGO75144 302 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 PDE9AO76083 593 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 OR12D1P0DN82 309 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 UQCRC2P22695 453 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 PRIM2P49643 509 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 DCAF7P61962 342 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 RCAN2Q14206 197 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 NTRK2Q16620 822 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 SLC22A10Q63ZE4 541 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 BLOC1S3Q6QNY0 202 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 FAM180AQ6UWF9 173 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 NATD1Q8N6N6 113 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ADAMTS15Q8TE58 950 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 SCMH1Q96GD3 660 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ITCHQ96J02 903 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 COL21A1Q96P44 957 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 LMF2Q9BU23 707 aaKnown RBP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 DOHHQ9BU89 302 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ZNF385DQ9H6B1 395 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 RMND5AQ9H871 391 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 SAR1AQ9NR31 198 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 LOC100653049A0A140TA62 436 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 GNB5O14775 395 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ACOX3O15254 700 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 CDC40O60508 579 aaKnown RBP eCLIP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 KRT34O76011 436 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 CYP4B1P13584 511 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 TMED10P49755 219 aaKnown RBP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 HSF1Q00613 529 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 DECR1Q16698 335 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ZNF605Q86T29 641 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 MTDHQ86UE4 582 aaKnown RBP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ZNF614Q8N883 585 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 OR2M7Q8NG81 312 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 SFXN5Q8TD22 340 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 XAGE5Q8WWM1 108 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 GTF2H4Q92759 462 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 ACTRT3Q9BYD9 372 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 KLF13Q9Y2Y9 288 aaPredicted RBP12.13□□□□□ -0.47
TUBD1-202ENST00000340993 HRH3Q9Y5N1 445 aa12.13□□□□□ -0.47
TUBD1-202ENST00000340993 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 TP53I11O14683 189 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 ANGPT2O15123 496 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 HS6ST1O60243 411 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 KCNK2O95069 426 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 KCNH1O95259 989 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 MST1P26927 711 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 MASP1P48740 699 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 ATP4BP51164 291 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 KLF10Q13118 480 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 TOMM20Q15388 145 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 CDC73Q6P1J9 531 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms