RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 NEDD8Q15843 81 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 GUSBP11Q6P575 273 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 KCTD8Q6ZWB6 473 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 ZNF595Q8IYB9 648 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 EDAQ92838 391 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 HRASLS5Q96KN8 279 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 RBM38Q9H0Z9 239 aaKnown RBP20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 ANGPTL1O95841 491 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 KLHL17Q6TDP4 642 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 KANSL1Q7Z3B3 1105 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 B3GNT8Q7Z7M8 397 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 SAP25Q8TEE9 199 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 FBLIM1Q8WUP2 373 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 DHRS1Q96LJ7 313 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 EPB41L1Q9H4G0 881 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 MTHFD2LQ9H903 347 aaPredicted RBP20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 POLR1BQ9H9Y6 1135 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 PAK1IP1Q9NWT1 392 aaPredicted RBP20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 NTNG1Q9Y2I2 539 aa20.89■□□□□ 0.93
PDLIM2-203ENST00000339162 SEC16AO15027 2179 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 PGDP52209 483 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF267Q14586 743 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 MAPK14Q16539 360 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 INAVAQ3KP66 663 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 EXOSC6Q5RKV6 272 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 TMEM236Q5W0B7 351 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 NMD3Q96D46 503 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 PITX2Q99697 317 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 RHNO1Q9BSD3 238 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 MAN2C1Q9NTJ4 1040 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 DTX4Q9Y2E6 619 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 MN1Q10571 1320 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 CPSF4LA6NMK7 179 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 PEX12O00623 359 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 SIGLEC6O43699 453 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 NTN1O95631 604 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 HTR1AP08908 422 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 MAP4K2Q12851 820 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 PMS2P3Q13401 168 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 NR1D2Q14995 579 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 MAD2L1BPQ15013 274 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 PERM1Q5SV97 790 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 PODNL1Q6PEZ8 512 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 ENTHD1Q8IYW4 607 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 D2HGDHQ8N465 521 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 DGCR14Q96DF8 476 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 DGAT2Q96PD7 388 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 CNPPD1Q9BV87 410 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 GAREM1Q9H706 876 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 NECTIN3Q9NQS3 549 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 DUSP22Q9NRW4 184 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 NDUFA13Q9P0J0 144 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 SUSD2Q9UGT4 822 aa20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF443Q9Y2A4 671 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-203ENST00000339162 BDP1A6H8Y1 2624 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 E9PQ18 207 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 M0R129 80 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF749O43361 778 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 SLITRK5O94991 958 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 IFNA16P05015 189 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 IDH2P48735 452 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 NIPAL1Q6NVV3 410 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF773Q6PK81 442 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF836Q6ZNA1 936 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ZAR1Q86SH2 424 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 PEX5LQ8IYB4 626 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 OR4N2Q8NGD1 307 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 FAM81AQ8TBF8 368 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ADAMTS16Q8TE57 1224 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ARHGDIGQ99819 225 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF350Q9GZX5 532 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 KCNE5Q9UJ90 142 aa20.87■□□□□ 0.93
PDLIM2-203ENST00000339162 H0YIG0 161 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 IGFBP1P08833 259 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 POU1F1P28069 291 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 PRKAR1BP31321 381 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 TRHRP34981 398 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 MAP3K8P41279 467 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 SLC41A2Q96JW4 573 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 PRRC1Q96M27 445 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 PSD2Q9BQI7 771 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 FUZQ9BT04 418 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 SLC6A14Q9UN76 642 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 RNF6Q9Y252 685 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 CEPT1Q9Y6K0 416 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 ADAMTS9Q9P2N4 1935 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 LY6G6EA0A0G2JKS1 128 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 SH3PXD2BA1X283 911 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 SYT5O00445 386 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 STX11O75558 287 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 SOX14O95416 240 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 PEX19P40855 299 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 EMDP50402 254 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 TAS2R41P59536 307 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 PSG6Q00889 435 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 NNATQ16517 81 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 MFSD4BQ5TF39 518 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 WDR74Q6RFH5 385 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF574Q6ZN55 896 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 MEX3DQ86XN8 651 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms