RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 OR52P1PQ8NH57 321 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 SLC37A2Q8TED4 501 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 NR4A3Q92570 626 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 ZNF576Q9H609 170 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 PRDM9Q9NQV7 894 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 TVP23BQ9NYZ1 205 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 MKLN1Q9UL63 735 aa16.28■□□□□ 0.2
DDX28-201ENST00000332395 CPSF4LA6NMK7 179 aaKnown RBP16.27■□□□□ 0.2
DDX28-201ENST00000332395 H3BQ06 376 aaPredicted RBP16.27■□□□□ 0.2
DDX28-201ENST00000332395 CYP7B1O75881 506 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 AGR2O95994 175 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 AVPR1BP47901 424 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 EIF2B5Q13144 721 aaKnown RBP16.27■□□□□ 0.2
DDX28-201ENST00000332395 PERM1Q5SV97 790 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 MFSD4BQ5TF39 518 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 MEDAGQ5VYS4 303 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 PRSS41Q7RTY9 318 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 TMEFF1Q8IYR6 380 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 GJD3Q8N144 294 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 RSC1A1Q92681 617 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 DIO2Q92813 273 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 SLC6A18Q96N87 628 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 MGLLQ99685 303 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 OR51E2Q9H255 320 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 TRIM45Q9H8W5 580 aaPredicted RBP16.27■□□□□ 0.2
DDX28-201ENST00000332395 LYRM4Q9HD34 91 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 SEMA4GQ9NTN9 838 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 KLHL28Q9NXS3 571 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 PTGFRNQ9P2B2 879 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 CYP8B1Q9UNU6 501 aa16.27■□□□□ 0.2
DDX28-201ENST00000332395 KIR2DS5A0A0G2JLQ3 304 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 A0A0G2JNG1 304 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 A0A0J9YY10 115 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 LOC100506127A0A0U1RQW1 187 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 KIR2DS3K7RE56 304 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 PRKYO43930 277 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 GSTM3P21266 225 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 TGM1P22735 817 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 GIPRP48546 466 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 ID2Q02363 134 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 ZNF91Q05481 1191 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 GINS1Q14691 196 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 KIR2DS5Q14953 304 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 OCLNQ16625 522 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 KIAA0895LQ68EN5 471 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 Q6ZS52 159 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 USP43Q70EL4 1123 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 RNF44Q7L0R7 432 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 BCDIN3DQ7Z5W3 292 aaKnown RBP16.27■□□□□ 0.19
DDX28-201ENST00000332395 CLIP4Q8N3C7 705 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 MFSD4AQ8N468 514 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 TOE1Q96GM8 510 aaKnown RBP16.27■□□□□ 0.19
DDX28-201ENST00000332395 POLDIP3Q9BY77 421 aaKnown RBP16.27■□□□□ 0.19
DDX28-201ENST00000332395 NDRG2Q9UN36 371 aaKnown RBP16.27■□□□□ 0.19
DDX28-201ENST00000332395 RPL36Q9Y3U8 105 aaKnown RBP16.27■□□□□ 0.19
DDX28-201ENST00000332395 PCDHGA3Q9Y5H0 932 aa16.27■□□□□ 0.19
DDX28-201ENST00000332395 SPTY2D1-AS1A0A0U1RR47 76 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 OR5K4A6NMS3 321 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 CCNYL3P0C7X3 344 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 DBTP11182 482 aaKnown RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 BMP4P12644 408 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TRHRP34981 398 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 SOX18P35713 384 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 PCYT1AP49585 367 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 CCR5P51681 352 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 CDK5Q00535 292 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 IFITM3Q01628 133 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 ST3GAL3Q11203 375 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TRAM2Q15035 370 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 DUSP5Q16690 384 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 ZNF628Q5EBL2 1059 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TAF8Q7Z7C8 310 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 MEX3DQ86XN8 651 aaKnown RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 SHISA5Q8N114 240 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 ZNF655Q8N720 491 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 EFHD2Q96C19 240 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 WDR45Q9Y484 360 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TLX2O43763 284 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 LDB3O75112 727 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 IGLV3-19P01714 112 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 CSTF2P33240 577 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDX28-201ENST00000332395 IFNGR2P38484 337 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 LIMK1P53667 647 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 RGS8P57771 180 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 HOXC5Q00444 222 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 DOC2BQ14184 412 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 COL19A1Q14993 1142 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TSTQ16762 297 aaKnown RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 TRMT12Q53H54 448 aaKnown RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 TYW3Q6IPR3 259 aaKnown RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 ACSM5Q6NUN0 579 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 ZNF761Q86XN6 746 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 KIF18BQ86Y91 864 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 FAM26EQ8N5C1 309 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 MCFD2Q8NI22 146 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TMEM80Q96HE8 168 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 TSSK6Q9BXA6 273 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 PLA2G12AQ9BZM1 189 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms