RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 BCAP29Q9UHQ4 241 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 HEATR5AQ86XA9 2040 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 C15orf38-AP3S2A0A0A6YYH1 394 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 IQCF5A8MTL0 148 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PSMD12O00232 456 aaPredicted RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PIP5K1BO14986 540 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 GYG2O15488 501 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ATP6V1G2O95670 118 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PPP1R3DO95685 299 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 JUNP05412 331 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ALDOCP09972 364 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 KITP10721 976 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PRPS2P11908 318 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 MAPK1P28482 360 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PGGT1BP53609 377 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 EMP3P54852 163 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ACTR3P61158 418 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 KCNJ2P63252 427 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ROR2Q01974 943 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 LETMD1Q6P1Q0 360 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 GALNT18Q6P9A2 607 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 Q6ZSR9 355 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ARPINQ7Z6K5 226 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 AMZ2Q86W34 360 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 RPS19BP1Q86WX3 136 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 TBC1D21Q8IYX1 336 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 MIER2Q8N344 545 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 OR4F6Q8NGB9 312 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 OR4E2Q8NGC2 313 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 WDR20Q8TBZ3 569 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 TRPC4APQ8TEL6 797 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 METTL21AQ8WXB1 218 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 TESCQ96BS2 214 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SERPINI1Q99574 410 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SHCBP1LQ9BZQ2 653 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SH2D2AQ9NP31 389 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PRDM9Q9NQV7 894 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 NOP53Q9NZM5 478 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 MARCOQ9UEW3 520 aaPredicted RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SNX6Q9UNH7 406 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 C15orf41Q9Y2V0 281 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 MMP24Q9Y5R2 645 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ARHGEF33A8MVX0 844 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 B2RBV5 119 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 MANBAO00462 879 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 BTN3A3O00478 584 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 GPR39O43194 453 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 SKAP2O75563 359 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 KRT6AP02538 564 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 KRT6BP04259 564 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 DANCRP0C864 163 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 C8orf89P0DMQ9 161 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 PPP3CBP16298 524 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 HOXB9P17482 250 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 HRH2P25021 359 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 EPHA3P29320 983 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 AKT1P31749 480 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 PIK3CBP42338 1070 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 OR1D4P47884 311 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 KRT6CP48668 564 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 AGTR2P50052 363 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 CCR8P51685 355 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 GRB7Q14451 532 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 ZIC1Q15915 447 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 DPY19L1Q2PZI1 675 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 PIGGQ5H8A4 983 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 C6orf136Q5SQH8 315 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 TMEM220Q6QAJ8 160 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 FKBP9P1Q75LS8 142 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 MYLK4Q86YV6 388 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 DCUN1D3Q8IWE4 304 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 OR4K1Q8NGD4 311 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 OR9A1PQ8NGU1 263 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 OR5K2Q8NHB8 316 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 UBE2E3Q969T4 207 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 C3orf30Q96M34 536 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 NSUN5Q96P11 429 aaKnown RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 HAUS8Q9BT25 410 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 MED18Q9BUE0 208 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 RHBGQ9H310 441 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 MVB12BQ9H7P6 319 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 DCLRE1BQ9H816 532 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 NOL11Q9H8H0 719 aaKnown RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 TMEM181Q9P2C4 612 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 STOX2Q9P2F5 926 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 CD300AQ9UGN4 299 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 LIPT1Q9Y234 373 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 A0A1W2PP18 115 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 SSX4O60224 188 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 KDM1AO60341 852 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 IMPDH2P12268 514 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 HSD17B1P14061 328 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 IMPA1P29218 277 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 RFC3P40938 356 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 TRIM73Q86UV7 250 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 VRK3Q8IV63 474 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 FUNDC1Q8IVP5 155 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms