RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PRSS58Q8IYP2 241 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 OR10G2Q8NGC3 310 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 OR4D9Q8NGE8 314 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 GIPC3Q8TF64 312 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 RASSF5Q8WWW0 418 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 CCDC74BQ96LY2 380 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 PTCHD1Q96NR3 888 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 PAPOLBQ9NRJ5 636 aaKnown RBP17.13■□□□□ 0.33
USP39-201ENST00000323701 WDR45Q9Y484 360 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 LOC100130705A0A1B0GUX0 176 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 BMP10O95393 424 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 CLPSP04118 112 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 ALPPP05187 535 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 ALOX5P09917 674 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 MPLP40238 635 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 ROR2Q01974 943 aaKnown RBP17.13■□□□□ 0.33
USP39-201ENST00000323701 ZNF155Q12901 538 aaPredicted RBP17.13■□□□□ 0.33
USP39-201ENST00000323701 GPR68Q15743 365 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 Q6ZPB1 254 aaPredicted RBP17.13■□□□□ 0.33
USP39-201ENST00000323701 ZNF321PQ8N8H1 164 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 HOXB13Q92826 284 aaPredicted RBP17.13■□□□□ 0.33
USP39-201ENST00000323701 DGAT2Q96PD7 388 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 DPYSL5Q9BPU6 564 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 CNPPD1Q9BV87 410 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 ZNF350Q9GZX5 532 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 DUSP22Q9NRW4 184 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 SLC22A11Q9NSA0 550 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 KRT84Q9NSB2 600 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 AASSQ9UDR5 926 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 ACAD8Q9UKU7 415 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 ERVK-19Q9WJR5 959 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 NTNG1Q9Y2I2 539 aa17.13■□□□□ 0.33
USP39-201ENST00000323701 PEX12O00623 359 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 TOX3O15405 576 aaPredicted RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 SLITRK5O94991 958 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 NTN1O95631 604 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 IFNA16P05015 189 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 POU2F1P14859 743 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ATP6V1B1P15313 513 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 DSG2Q14126 1118 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 CTU2Q2VPK5 515 aaKnown RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 LAIR2Q6ISS4 152 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 COX18Q8N8Q8 333 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 CHDHQ8NE62 594 aaPredicted RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 OR52P1PQ8NH57 321 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ADAMTS18Q8TE60 1221 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 MVB12AQ96EY5 273 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 OR6C1Q96RD1 312 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 PINK1Q9BXM7 581 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 GRIP2Q9C0E4 1043 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 CLK4Q9HAZ1 481 aaKnown RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 FOLH1BQ9HBA9 442 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 KIF17Q9P2E2 1029 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 CTSFQ9UBX1 484 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 R4GN57 208 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 DSCR3O14972 297 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ANKRD34CP0C6C1 535 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 RAPSNQ13702 412 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 NNATQ16517 81 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 CNPY1Q3B7I2 92 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 MINDY4Q4G0A6 757 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 MFSD4BQ5TF39 518 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ZNF770Q6IQ21 691 aaPredicted RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 NPSR1Q6W5P4 371 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 B3GNT8Q7Z7M8 397 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 PHF10Q8WUB8 498 aaKnown RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 PTPMT1Q8WUK0 201 aaPredicted RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 NAT6Q93015 286 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ARSGQ96EG1 525 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 RMND5BQ96G75 393 aaPredicted RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 CNDP2Q96KP4 475 aaKnown RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 VSTM2LQ96N03 204 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ALPK1Q96QP1 1244 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 MESP1Q9BRJ9 268 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 SPATA5L1Q9BVQ7 753 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 ZNF304Q9HCX3 659 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 MAN2C1Q9NTJ4 1040 aa17.12■□□□□ 0.33
USP39-201ENST00000323701 HEMK1Q9Y5R4 338 aaPredicted RBP17.12■□□□□ 0.33
USP39-201ENST00000323701 IGKV3D-11A0A0A0MRZ8 115 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 A0A1B0GX78 115 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 BLACEA4D250 179 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 A8MUA0 341 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 SLC16A6O15403 523 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 BCAS1O75363 584 aaPredicted RBP17.11■□□□□ 0.33
USP39-201ENST00000323701 NKX2-2O95096 273 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 IGKV1D-16P01601 117 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 RAD23AP54725 363 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 HPCAP84074 193 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 DAB2P98082 770 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 APOFQ13790 326 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 TTC33Q6PID6 262 aaPredicted RBP17.11■□□□□ 0.33
USP39-201ENST00000323701 CCDC71Q8IV32 467 aaPredicted RBP17.11■□□□□ 0.33
USP39-201ENST00000323701 ZFAND2BQ8WV99 257 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 DHRS1Q96LJ7 313 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 STACQ99469 402 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 MTHFD2LQ9H903 347 aaPredicted RBP17.11■□□□□ 0.33
USP39-201ENST00000323701 APMAPQ9HDC9 416 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 CALML5Q9NZT1 146 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 MYRFQ9Y2G1 1151 aa17.11■□□□□ 0.33
USP39-201ENST00000323701 AGR2O95994 175 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms