RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RPL6Q02878 288 aaKnown RBP16.81■□□□□ 0.28
PRKCB-202ENST00000321728 SUZ12Q15022 739 aaKnown RBP16.81■□□□□ 0.28
PRKCB-202ENST00000321728 POM121L1PQ3SYA9 428 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 VASNQ6EMK4 673 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 SLC30A6Q6NXT4 461 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 BHLHB9Q6PI77 547 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 NXPE4Q6UWF7 544 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 LYPD4Q6UWN0 246 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 RTL4Q6ZR62 310 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 C2orf73Q8N5S3 287 aaPredicted RBP16.81■□□□□ 0.28
PRKCB-202ENST00000321728 POGLUT1Q8NBL1 392 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 OR8K5Q8NH50 307 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 NXPE2Q96DL1 559 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 RBP7Q96R05 134 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 ABHD1Q96SE0 405 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 KCNN2Q9H2S1 579 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 NEUROD4Q9HD90 331 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 RDH8Q9NYR8 311 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 NUBP2Q9Y5Y2 271 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 UNC80Q8N2C7 3258 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 FAM170BA6NMN3 283 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 CACNB4O00305 520 aaPredicted RBP16.81■□□□□ 0.28
PRKCB-202ENST00000321728 SSNA1O43805 119 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 SERPINI2O75830 405 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 TOXO94900 526 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 RRASP10301 218 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 ACP5P13686 325 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 RBMS1P29558 406 aaKnown RBP16.81■□□□□ 0.28
PRKCB-202ENST00000321728 IKZF1Q13422 519 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 HBMQ6B0K9 141 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 TMEM220Q6QAJ8 160 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 Q6ZNB5 142 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 OAFQ86UD1 273 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 C7orf57Q8NEG2 295 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 RASD1Q9Y272 281 aa16.81■□□□□ 0.28
PRKCB-202ENST00000321728 A0A087WUU8 490 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 RGS9O75916 674 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 POP4O95707 220 aaKnown RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 CFDP00746 253 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 GAAP10253 952 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 GJA1P17302 382 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 PPP2R1BP30154 601 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 VSX2P58304 361 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 POLR2LP62875 67 aaKnown RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 FKBP1BP68106 108 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 CAMK2DQ13557 499 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 Q6ZVU0 165 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 PRICKLE2Q7Z3G6 844 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 PRSS42Q7Z5A4 293 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 SLC9B2Q86UD5 537 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 LSRQ86X29 649 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 POF1BQ8WVV4 589 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 WDR34Q96EX3 536 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 MS4A3Q96HJ5 214 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 FAM46AQ96IP4 442 aaKnown RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 OR51I1Q9H343 314 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 BEX1Q9HBH7 125 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 CBLCQ9ULV8 474 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 CLEC4AQ9UMR7 237 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 YIPF1Q9Y548 306 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 NTN1O95631 604 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 RFX3P48380 749 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 MTNR1BP49286 362 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 ZNF322Q6U7Q0 402 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 CHMP1BQ7LBR1 199 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 RRM2BQ7LG56 351 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 TOMM5Q8N4H5 51 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 BBS1Q8NFJ9 593 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 LHFPL5Q8TAF8 219 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 PMEPA1Q969W9 287 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 PRRC1Q96M27 445 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 FCRL4Q96PJ5 515 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 VN1R3Q9BXE9 311 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 CACNG6Q9BXT2 260 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
PRKCB-202ENST00000321728 ISG20L2Q9H9L3 353 aaKnown RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 SIRT3Q9NTG7 399 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-202ENST00000321728 GPR171O14626 319 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 RNF13O43567 381 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 CD3GP09693 182 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 CCR6P51684 374 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 CRYZQ08257 329 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 PUDPQ08623 228 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 FAM122CQ6P4D5 195 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 TMEM150AQ86TG1 271 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 CFAP206Q8IYR0 622 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 BMPERQ8N8U9 685 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 RBPMSQ93062 196 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 TIFAQ96CG3 184 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 C12orf66Q96MD2 445 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 ZSWIM3Q96MP5 696 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 DDX31Q9H8H2 851 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 AHSPQ9NZD4 102 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 LSM7Q9UK45 103 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 MRPS7Q9Y2R9 242 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 MAB21L2Q9Y586 359 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 ATP6V1G2-DDX39BF2Z307 99 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 GNSP15586 552 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms