RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SCO1O75880 301 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 FADS2O95864 444 aaKnown RBP12.27□□□□□ -0.45
CPNE1-201ENST00000317677 HOXD4P09016 255 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-201ENST00000317677 ETFAP13804 333 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 UGT2B7P16662 529 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 CPN2P22792 545 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 RPL3P39023 403 aaKnown RBP12.27□□□□□ -0.45
CPNE1-201ENST00000317677 LSSP48449 732 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 FCRL6Q6DN72 434 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 FBXO42Q6P3S6 717 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 ABHD17CQ6PCB6 329 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 PLEKHM3Q6ZWE6 761 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 YIPF7Q8N8F6 280 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 SLC37A2Q8TED4 501 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 TBC1D20Q96BZ9 403 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 FRMD6Q96NE9 622 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 SLC35A5Q9BS91 424 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 C14orf119Q9NWQ9 140 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 MRPL39Q9NYK5 338 aaKnown RBP12.27□□□□□ -0.45
CPNE1-201ENST00000317677 CPNE7Q9UBL6 633 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 ELF5Q9UKW6 265 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-201ENST00000317677 KNL1Q8NG31 2342 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 A0A1W2PR77 199 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 OR6C74A6NCV1 312 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 M0R082 166 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 PRAMEF10O60809 474 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 B4GALT2O60909 372 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 CTSVO60911 334 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 CCNDBP1O95273 360 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 CST1P01037 141 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 SEMG1P04279 462 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 GADD45AP24522 165 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 MYL9P24844 172 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 DCTP40126 519 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 FRKP42685 505 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-201ENST00000317677 ALDH9A1P49189 494 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
CPNE1-201ENST00000317677 ANGPT1Q15389 498 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 MRM1Q6IN84 353 aaKnown RBP12.26□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF761Q86XN6 746 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-201ENST00000317677 OR8H2Q8N162 312 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF540Q8NDQ6 660 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 OR8K5Q8NH50 307 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 OPALINQ96PE5 141 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 LRRC61Q9BV99 259 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 MIEF1Q9NQG6 463 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 ZC4H2Q9NQZ6 224 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 TAS2R7Q9NYW3 318 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 KLK4Q9Y5K2 254 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 KLF2Q9Y5W3 355 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-201ENST00000317677 TP53BP1Q12888 1972 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-201ENST00000317677 SCN3AQ9NY46 2000 aa12.26□□□□□ -0.45
CPNE1-201ENST00000317677 ERI3O43414 337 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 SH3BP5O60239 455 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 HS6ST1O60243 411 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF217O75362 1048 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 LCKP06239 509 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 IL1RNP18510 177 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ATP5A1P25705 553 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 MAOBP27338 520 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 FMO3P31513 532 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 KDELR2P33947 212 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 SSR2P43308 183 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 PPP1CAP62136 330 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 CD83Q01151 205 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TEKQ02763 1124 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 SCN1BQ07699 218 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 LRRC74AQ0VAA2 488 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TBCEQ15813 527 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 SLC5A12Q1EHB4 618 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 BTBD16Q32M84 506 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TMEM35AQ53FP2 167 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 GPAT4Q86UL3 456 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TSPYL5Q86VY4 417 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 OR52N2Q8NGI0 321 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 OR10G6Q8NH81 332 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 KLHDC7BQ96G42 594 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 PYURFQ96I23 114 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 HDHD5Q9BXW7 423 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 GSDMCQ9BYG8 508 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 RNF121Q9H920 327 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 SIRT3Q9NTG7 399 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 VNN3Q9NY84 501 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ACTR10Q9NZ32 417 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF175Q9Y473 711 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ASB4Q9Y574 426 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ABCA7Q8IZY2 2146 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 METTL12A8MUP2 240 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 B4DXG7 233 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 P2RX6O15547 441 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 AKR7A2O43488 359 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TNFSF14O43557 240 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF254O75437 659 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 DCNP07585 359 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 IFI30P13284 250 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TNNI3P19429 210 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 PPIBP23284 216 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 CERS1P27544 350 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TNFSF8P32971 234 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms