RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ZNF384Q8TF68 577 aa13□□□□□ -0.33
CLCN6-201ENST00000312413 HEBP1Q9NRV9 189 aa13□□□□□ -0.33
CLCN6-201ENST00000312413 TMEM100Q9NV29 134 aa13□□□□□ -0.33
CLCN6-201ENST00000312413 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
CLCN6-201ENST00000312413 CAV3P56539 151 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 GK3PQ14409 553 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 OR4C11Q6IEV9 310 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 FIGNL1Q6PIW4 674 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 DNAJA3Q96EY1 480 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SPIN2AQ99865 258 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SPIN2BQ9BPZ2 258 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 GPRC5BQ9NZH0 403 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 TRIM64BA6NI03 449 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 KNG1P01042 644 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 HEXBP07686 556 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SYPP08247 313 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 OR1J4Q8NGS1 313 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 OR5W2Q8NH69 310 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 FRZBQ92765 325 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SAMD8Q96LT4 415 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 MTHFD2LQ9H903 347 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 TSTD3H0UI37 97 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SNAPINO95295 136 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ADH1BP00325 375 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 FGF4P08620 206 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 HOXB2P14652 356 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 TLE3Q04726 772 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 RSU1Q15404 277 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ZC3H14Q6PJT7 736 aaKnown RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 CPOQ8IVL8 374 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 NAGSQ8N159 534 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 LMX1AQ8TE12 382 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 C16orf78Q8WTQ4 265 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 IL17FQ96PD4 163 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 CNOT4O95628 575 aaKnown RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SCAPQ12770 1279 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 VEZF1Q14119 521 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 RNF111Q6ZNA4 994 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 FAM109AQ8N4B1 249 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 IGSF8Q969P0 613 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 LRIG1Q96JA1 1093 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 OR2M4Q96R27 311 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 GAS2L1Q99501 681 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 DPH7Q9BTV6 452 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 IGSF5Q9NSI5 407 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 IL20RAQ9UHF4 553 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 AK6Q9Y3D8 172 aaKnown RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 CCDC163A0A0D9SF12 145 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 A0A1W2PQ09 198 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 KIAA0355O15063 1070 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 VEGFDO43915 354 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SYNGR4O95473 234 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SLC11A1P49279 550 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF136P52737 540 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 PTPRRQ15256 657 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 SLC35G1Q2M3R5 365 aa12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ERN2Q76MJ5 926 aaKnown RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 METTL27Q8N6F8 245 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF300Q96RE9 604 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-201ENST00000312413 PRAMEF2O60811 474 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF551Q7Z340 670 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-201ENST00000312413 B3GNT7Q8NFL0 401 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 INPP5KQ9BT40 448 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 MVB12BQ9H7P6 319 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 IL21RQ9HBE5 538 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 SLC2A4RGQ9NR83 387 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 DCAF13Q9NV06 445 aaKnown RBP12.98□□□□□ -0.33
CLCN6-201ENST00000312413 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 ATG4BQ9Y4P1 393 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 BACE2Q9Y5Z0 518 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 COCHO43405 550 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 B4GAT1O43505 415 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 GSRP00390 522 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 DLX5P56178 289 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 TAP2Q03519 686 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 MLC1Q15049 377 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 TEAD2Q15562 447 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 SGPP2Q8IWX5 399 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 HAVCR2Q8TDQ0 301 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 DNTTIP1Q9H147 329 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 C2orf42Q9NWW7 574 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 ZCWPW2A0A1B0GU75 182 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF736B4DX44 427 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-201ENST00000312413 LILRB5O75023 590 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 ATE1O95260 518 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 CFIP05156 583 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 CD6P30203 668 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 HMGCLP35914 325 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 CXCR4P61073 352 aa12.98□□□□□ -0.33
CLCN6-201ENST00000312413 EMX1Q04741 257 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms