RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 NR4A3Q92570 626 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 SENP5Q96HI0 755 aaPredicted RBP13.12□□□□□ -0.31
EIF3F-201ENST00000309828 RDH12Q96NR8 316 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 RBM4BQ9BQ04 359 aaKnown RBP13.12□□□□□ -0.31
EIF3F-201ENST00000309828 RBM4Q9BWF3 364 aaKnown RBP13.12□□□□□ -0.31
EIF3F-201ENST00000309828 OSBPL11Q9BXB4 747 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 Q9N2J8 555 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 PARD6AQ9NPB6 346 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 USE1Q9NZ43 259 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 ZNF232Q9UNY5 417 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 SH3GLB1Q9Y371 365 aa13.12□□□□□ -0.31
EIF3F-201ENST00000309828 OR6C76A6NM76 312 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PDLIM1O00151 329 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 HRKO00198 91 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 EI24O14681 340 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 DENRO43583 198 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 KIAA0513O60268 411 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 LGI1O95970 557 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 CLPSP04118 112 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 DBIP07108 87 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 CD63P08962 238 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 CCL4P13236 92 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 RPS4Y1P22090 263 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 OR1E2P47887 323 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 SLC37A1P57057 533 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 DCAF7P61962 342 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PSPHP78330 225 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PSG6Q00889 435 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 EPS8Q12929 822 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 EIF3IQ13347 325 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PUM1Q14671 1186 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■■■□□ 15.2
EIF3F-201ENST00000309828 LARS2Q15031 903 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 NRF1Q16656 503 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 DCAF12Q5T6F0 453 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 TSEN54Q7Z6J9 526 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 STK32CQ86UX6 486 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 CARM1Q86X55 608 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 C16orf52Q8NHV5 167 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 SLC2A12Q8TD20 617 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 METTL21AQ8WXB1 218 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PIP5K1AQ99755 562 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 CTRCQ99895 268 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 DDA1Q9BW61 102 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 AMBRA1Q9C0C7 1298 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 KLHL28Q9NXS3 571 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 GPN3Q9UHW5 284 aaPredicted RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 SAMHD1Q9Y3Z3 626 aaKnown RBP13.11□□□□□ -0.31
EIF3F-201ENST00000309828 LOXL2Q9Y4K0 774 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 RALGAPA1Q6GYQ0 2036 aa13.11□□□□□ -0.31
EIF3F-201ENST00000309828 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 AGAP5A6NIR3 686 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 IDSB3KWA1 339 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 PCDH17O14917 1159 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 BRINP1O60477 761 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 FCMRO60667 390 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ALOX12BO75342 701 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 NME6O75414 186 aaPredicted RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 KCNK2O95069 426 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 DDAH2O95865 285 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 TGM1P22735 817 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 RRM2P31350 389 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 PPICP45877 212 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 EFNA3P52797 238 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 EMP2P54851 167 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 PSMD4P55036 377 aaKnown RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 SMIM11AP58511 58 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 MED21Q13503 144 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ZSWIM7Q19AV6 140 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 RFX4Q33E94 735 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ZNF721Q8TF20 911 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 DEPDC7Q96QD5 511 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ARHGDIGQ99819 225 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ARMC7Q9H6L4 198 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 SMPD3Q9NY59 655 aaPredicted RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 COPS7AQ9UBW8 275 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 KCND3Q9UK17 655 aa13.1□□□□□ -0.31
EIF3F-201ENST00000309828 ZNF443Q9Y2A4 671 aaPredicted RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 GPR55Q9Y2T6 319 aaPredicted RBP13.1□□□□□ -0.31
EIF3F-201ENST00000309828 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 C7orf72A4D263 438 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 C9J4A7 227 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 AGRPO00253 132 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 TNFRSF11BO00300 401 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 DIRAS1O95057 198 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 MT-CO3P00414 261 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 ALPLP05186 524 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms