RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 CLDND1Q9NY35 253 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 CES1P1Q9UKY3 287 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 KLK4Q9Y5K2 254 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MYO15AQ9UKN7 3530 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MUC22E2RYF6 1773 aaPredicted RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 COL4A3Q01955 1670 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 CENPVL1A0A0U1RR11 272 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 PIP5K1CO60331 668 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 GKN3PP0CG01 181 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 TYRP1P17643 537 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 RUNX1T1Q06455 604 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 C1orf61Q13536 156 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 AGERQ15109 404 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 DEFB110Q30KQ9 67 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 FAM214AQ32MH5 1076 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF425Q6IV72 752 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ZC3H14Q6PJT7 736 aaKnown RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 HSDL2Q6YN16 418 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 KIF18BQ86Y91 864 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MORN4Q8NDC4 146 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 OR4K14Q8NGD5 310 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 OR52I1Q8NGK6 324 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM255BQ8WV15 326 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 RNFT2Q96EX2 444 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ART5Q96L15 291 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MRGPRX1Q96LB2 322 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF582Q96NG8 517 aaPredicted RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 PSD2Q9BQI7 771 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 PINK1Q9BXM7 581 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ACTRT3Q9BYD9 372 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SSR3Q9UNL2 185 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MRPS2Q9Y399 296 aaKnown RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 FAM183AA6NL82 134 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 CDRT1O95170 752 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TP53P04637 393 aaPredicted RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 CD97P48960 835 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 MAN2A2P49641 1150 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SLC16A1P53985 500 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ST3GAL3Q11203 375 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TRAM2Q15035 370 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 FBXO42Q6P3S6 717 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 FIGNL1Q6PIW4 674 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TRIM69Q86WT6 500 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 CAMKK1Q8N5S9 505 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 OR8D4Q8NGM9 314 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PIK3R3Q92569 461 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 GAL3ST3Q96A11 431 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 BMFQ96LC9 184 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 RACGAP1Q9H0H5 632 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 BCL2L10Q9HD36 194 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ACAD8Q9UKU7 415 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PEX16Q9Y5Y5 336 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PIAS3Q9Y6X2 628 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ALPK3Q96L96 1907 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PLD2O14939 933 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 B3GALT2O43825 422 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ATP6V1G1O75348 118 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SCG5P05408 212 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 UGT2B7P16662 529 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 FUT1P19526 365 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TLX1P31314 330 aaPredicted RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SLC15A1P46059 708 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TPTEP56180 551 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 RPS15AP62244 130 aaKnown RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TEKQ02763 1124 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 COX10Q12887 443 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 RUNX2Q13950 521 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 NFATC4Q14934 902 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SUZ12Q15022 739 aaKnown RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 FIGLAQ6QHK4 219 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 UBE2Q1Q7Z7E8 422 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PAQR7Q86WK9 346 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 RPLP0P6Q8NHW5 317 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PIGXQ8TBF5 258 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF681Q96N22 645 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SLC38A2Q96QD8 506 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SMAD5Q99717 465 aaKnown RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TM9SF2Q99805 663 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TCEAL2Q9H3H9 227 aaPredicted RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 CSNK1G3Q9Y6M4 447 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 CASC3O15234 703 aaKnown RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 RAB36O95755 333 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 IFNGR2P38484 337 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TNFRSF4P43489 277 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SHC2P98077 582 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 DUSP5Q16690 384 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SLC35F1Q5T1Q4 408 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 C1orf94Q6P1W5 598 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 SFXN5Q8TD22 340 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 RERGQ96A58 199 aaPredicted RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 DHRS1Q96LJ7 313 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TRIM45Q9H8W5 580 aaPredicted RBP10.81□□□□□ -0.68
PTPN2-201ENST00000309660 MSRAQ9UJ68 235 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF232Q9UNY5 417 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 PCDHGB6Q9Y5F9 930 aa10.81□□□□□ -0.68
PTPN2-201ENST00000309660 TCRBV21S2A2A0A5A6 115 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SLC2A10O95528 541 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms