RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CDONQ4KMG0 1287 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF782Q6ZMW2 699 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 TBC1D19Q8N5T2 526 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 UCN3Q969E3 161 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 ARPC5LQ9BPX5 153 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 CACNG6Q9BXT2 260 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 FGF20Q9NP95 211 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 A0A087WUU8 490 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 A0A1W2PRU2 124 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 PRR23D1E9PI22 279 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 DVL2O14641 736 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 PGRMC2O15173 223 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 NTN1O95631 604 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 PRR23D2P0DMB1 279 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 CFL1P23528 166 aaKnown RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 NTSP30990 170 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 PITPNBP48739 271 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 PRLHRP49683 370 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 VSX2P58304 361 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 KIF18BQ86Y91 864 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 IL17RCQ8NAC3 791 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 GNPDA2Q8TDQ7 276 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 PRRC1Q96M27 445 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 AIF1LQ9BQI0 150 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 ZCCHC2Q9C0B9 1178 aaKnown RBP10.49□□□□□ -0.73
PTPN7-201ENST00000309017 RNF32Q9H0A6 362 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 UBQLN2Q9UHD9 624 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 ASB4Q9Y574 426 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 MYO15AQ9UKN7 3530 aa10.49□□□□□ -0.73
PTPN7-201ENST00000309017 TEX51A0A1B0GUA7 166 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 RGS9O75916 674 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 RAF1P04049 648 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 UBL4AP11441 157 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 ACP5P13686 325 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 SELPP16109 830 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 POLR2CP19387 275 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 SHC1P29353 583 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 GPR1P46091 355 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 CDK5Q00535 292 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF311Q5JNZ3 666 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 DEFB128Q7Z7B8 93 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 GPR135Q8IZ08 494 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 ADGRF3Q8IZF5 1079 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 FBXO15Q8NCQ5 510 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 BBS1Q8NFJ9 593 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TRMT61BQ9BVS5 477 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 KLHL28Q9NXS3 571 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 INSL5Q9Y5Q6 135 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 A0A1W2PPK0 400 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 H7BY64 318 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 OR1F1O43749 312 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 HLA-DQB1P01920 261 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TRIM23P36406 574 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 ANXA11P50995 505 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 RGS8P57771 180 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 DBPQ10586 325 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 DUSP6Q16828 381 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 FAM27D1Q5T7N8 215 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 PIP5KL1Q5T9C9 394 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 KHDRBS2Q5VWX1 349 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 LYPD4Q6UWN0 246 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 WASH2PQ6VEQ5 465 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 Q6ZNB5 142 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 LRRC28Q86X40 367 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 NUDT13Q86X67 352 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 CPOQ8IVL8 374 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 OR8D4Q8NGM9 314 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 ACOT12Q8WYK0 555 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 PRAP1Q96NZ9 151 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 CPEB1Q9BZB8 566 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 OSGEPL1Q9H4B0 414 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TEX10Q9NXF1 929 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 HS3ST2Q9Y278 367 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TRPM7Q96QT4 1865 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 DAPL1A0PJW8 107 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 SOCS6O14544 535 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 NPC1O15118 1278 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TP53P04637 393 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 EIF4EP06730 217 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 C8orf89P0DMQ9 161 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 SLC6A1P30531 599 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 KHKP50053 298 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 BTG1P62324 171 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 C1orf94Q6P1W5 598 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TMEM25Q86YD3 366 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 LSMEM1Q8N8F7 131 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 OR2T35Q8NGX2 323 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 OR8K5Q8NH50 307 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TRMT10AQ8TBZ6 339 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 APOBEC4Q8WW27 367 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TM4SF18Q96CE8 201 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TRMT2BQ96GJ1 504 aaKnown RBP10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TMEM175Q9BSA9 504 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 TDP1Q9NUW8 608 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 POLHQ9Y253 713 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 BACE2Q9Y5Z0 518 aa10.48□□□□□ -0.73
PTPN7-201ENST00000309017 MYOFQ9NZM1 2061 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms